RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 PIP5K1AQ99755 562 aa10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 BTBD2Q9BX70 525 aa10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 KLHL4Q9C0H6 718 aa10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 FBXO34Q9NWN3 711 aa10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 MKS1Q9NXB0 559 aa10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 ATP6V1HQ9UI12 483 aa10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 MCTS1Q9ULC4 181 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 EMC9Q9Y3B6 208 aa10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 PCNX3Q9H6A9 2034 aa10.55□□□□□ -0.72
CTNNA1-237ENST00000523275 UQCRHLA0A096LP55 91 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 A0A1W2PQD3 144 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 A0A1W2PRB8 838 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 SCDO00767 359 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 PIP5K1BO14986 540 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 CXCL13O43927 109 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 SMPD2O60906 423 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 PEX11AO75192 247 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 SYNGR4O95473 234 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 OPN1LWP04000 364 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 HMGN2P05204 90 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 INHBBP09529 407 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 IL11P20809 199 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 FPR1P21462 350 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 ME2P23368 584 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 MAPK1P28482 360 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 RPL3P39023 403 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 POU6F2P78424 691 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 ACKR1Q16570 336 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 EXOC3L2Q2M3D2 409 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 CTU2Q2VPK5 515 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 PLPPR5Q32ZL2 321 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 EXOSC6Q5RKV6 272 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 CCNJQ5T5M9 372 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 ANKRD34AQ69YU3 496 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 C22orf34Q6ZV56 151 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 TRABD2AQ86V40 505 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 KRTAP1-3Q8IUG1 177 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 P3H2Q8IVL5 708 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 LRRC75A-AS1Q8N1F1 130 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 OR7A2PQ8NGA2 310 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 OR6K3Q8NGY3 331 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 OR2W6PQ8NHA6 318 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 OR2V1Q8NHB1 315 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 B4GALNT2Q8NHY0 566 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 JADE3Q92613 823 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 CAVIN3Q969G5 261 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 FAM120BQ96EK7 910 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 OTUB1Q96FW1 271 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 CHMP6Q96FZ7 201 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 SH3YL1Q96HL8 342 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 ADGRG7Q96K78 797 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 MARK4Q96L34 752 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 RNF145Q96MT1 663 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 STACQ99469 402 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 PIGUQ9H490 435 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 DUSP22Q9NRW4 184 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 GLRX2Q9NS18 164 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 SIRT3Q9NTG7 399 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 ZCCHC3Q9NUD5 404 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 MED17Q9NVC6 651 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 GIN1Q9NXP7 522 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 CLEC4AQ9UMR7 237 aa10.54□□□□□ -0.72
CTNNA1-237ENST00000523275 A0A0J9YW62 118 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 SCAMP2O15127 329 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 SS18L1O75177 396 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 SOX30O94993 753 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 LAMP1P11279 417 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 PPP3CBP16298 524 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 ADSLP30566 484 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 EIF1P41567 113 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 CCT3P49368 545 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 CARD18P57730 90 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 PDSS1Q5T2R2 415 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 HBMQ6B0K9 141 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 GTF2IRD2BQ6EKJ0 949 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 ESPNLQ6ZVH7 1005 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 GTF2IRD2Q86UP8 949 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 LILRA2Q8N149 483 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 RIBC1Q8N443 379 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 NATD1Q8N6N6 113 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 POC1BQ8TC44 478 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 AGR3Q8TD06 166 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 OR5P2Q8WZ92 322 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 OSTF1Q92882 214 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 CDS1Q92903 461 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 TRIM44Q96DX7 344 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 NPAS1Q99742 590 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 MECRQ9BV79 373 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 HOXD1Q9GZZ0 328 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 TMEM185BQ9H7F4 350 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 L2HGDHQ9H9P8 463 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 UBTD1Q9HAC8 227 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 FANCFQ9NPI8 374 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 SLC17A7Q9P2U7 560 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 GIMAP2Q9UG22 337 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 SNX8Q9Y5X2 465 aa10.53□□□□□ -0.72
CTNNA1-237ENST00000523275 ZNF469Q96JG9 3925 aaPredicted RBP10.52□□□□□ -0.72
CTNNA1-237ENST00000523275 TNFSF11O14788 317 aa10.52□□□□□ -0.73
CTNNA1-237ENST00000523275 SPAG7O75391 227 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms