RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 DPAGT1Q9H3H5 408 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 C6orf106Q9H6K1 298 aaPredicted RBP5.31□□□□□ -1.56
SQLE-203ENST00000518931 ESRP2Q9H6T0 727 aaKnown RBP5.31□□□□□ -1.56
SQLE-203ENST00000518931 VCX3AQ9NNX9 186 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 NOX4Q9NPH5 578 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 ECHDC1Q9NTX5 307 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 ZNF701Q9NV72 531 aaPredicted RBP5.31□□□□□ -1.56
SQLE-203ENST00000518931 CD274Q9NZQ7 290 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 EPHA6Q9UF33 1036 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 LNPEPQ9UIQ6 1025 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 SIX4Q9UIU6 781 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 MAN1B1Q9UKM7 699 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 POFUT2Q9Y2G5 429 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 SCAF11Q99590 1463 aaKnown RBP5.31□□□□□ -1.56
SQLE-203ENST00000518931 FHOD3Q2V2M9 1422 aa5.31□□□□□ -1.56
SQLE-203ENST00000518931 SCN5AQ14524 2016 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 IGLV5-37A0A075B6J1 123 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 TRAV24A0A0B4J272 114 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 A0A1B0GW15 77 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 BCLAF3A2AJT9 711 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 ZNF840PA6NDX5 716 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ARGFXA6NJG6 315 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 EIF4E1BA6NMX2 242 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 SRRM3A6NNA2 597 aaPredicted RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 ERI2A8K979 691 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 LRRN3E7EW58 273 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 E7EWF7 191 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 F8VVB4 439 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 F8VWA3 439 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 NPIPA3F8WFD2 350 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 RNASEK-C17orf49H0YIS7 233 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ARPC1BO15143 372 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 MID1O15344 667 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 TOX3O15405 576 aaPredicted RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 SHOX2O60902 331 aaPredicted RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 PFDN1O60925 122 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 NDUFS7O75251 213 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 PPP1R3DO95685 299 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 FADS2O95864 444 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 CST4P01036 141 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 IGHV2-70P01814 119 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 PIGRP01833 764 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 RPN2P04844 631 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 IFNA6P05013 189 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 IGHV4-30-4P0DP06 118 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 CALM1P0DP23 149 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 CALM2P0DP24 149 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 CALM3P0DP25 149 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 FGF3P11487 239 aaPredicted RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 CTRB1P17538 263 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 GTF2E2P29084 291 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 MAGEA2P43356 314 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 NPBWR2P48146 333 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SERPINB8P50452 374 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 PSMD4P55036 377 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 AP3S2P59780 193 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ADARB1P78563 741 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 MAT1AQ00266 395 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 IL9RQ01113 521 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 KLC1Q07866 573 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SIGLEC14Q08ET2 396 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 CDC20Q12834 499 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 GRIK2Q13002 908 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SLAMF1Q13291 335 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ORC2Q13416 577 aaPredicted RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 SNTA1Q13424 505 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SF3B4Q15427 424 aaKnown RBP eCLIP5.3□□□□□ -1.566e-7■□□□□ 10.2
SQLE-203ENST00000518931 KNOP1Q1ED39 458 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 IZUMO4Q1ZYL8 232 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 GLYR1Q49A26 553 aaPredicted RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ZNF691Q5VV52 312 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 LIPKQ5VXJ0 399 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 CTRB2Q6GPI1 263 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ZNF770Q6IQ21 691 aaPredicted RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 C11orf63Q6NUN7 778 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 DUS1LQ6P1R4 473 aaKnown RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 ULK3Q6PHR2 472 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 CLEC18BQ6UXF7 455 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 VITQ6UXI7 678 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 DLK2Q6UY11 383 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 HSDL2Q6YN16 418 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 LRRC74BQ6ZQY2 392 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 G2E3Q7L622 706 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 H2BFWTQ7Z2G1 175 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 C16orf82Q7Z2V1 217 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 PID1Q7Z2X4 250 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SERPINA9Q86WD7 417 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ERICH1Q86X53 443 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SLC13A5Q86YT5 568 aaPredicted RBP5.3□□□□□ -1.56
SQLE-203ENST00000518931 ARHGAP18Q8N392 663 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ZNF786Q8N393 782 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 ALLCQ8N6M5 410 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 CYB561A3Q8NBI2 242 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 CCDC197Q8NCU1 140 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 OR51G2Q8NGK0 314 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SPATA22Q8NHS9 363 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SORCS1Q8WY21 1168 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 RND1Q92730 232 aa5.3□□□□□ -1.56
SQLE-203ENST00000518931 SMARCD2Q92925 531 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms