RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 LACC1Q8IV20 430 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 MCEMP1Q8IX19 187 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 PM20D2Q8IYS1 436 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 CHDHQ8NE62 594 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-219ENST00000518824 GOT1L1Q8NHS2 421 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-219ENST00000518824 POC1BQ8TC44 478 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 PNPT1Q8TCS8 783 aaKnown RBP12.02□□□□□ -0.49
VEGFA-219ENST00000518824 PHOSPHO1Q8TCT1 267 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 ZPLD1Q8TCW7 415 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 CKAP2Q8WWK9 683 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 SMPDL3BQ92485 455 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 ZG16BQ96DA0 208 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 NEURL3Q96EH8 262 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 SLC35A5Q9BS91 424 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 TRIM8Q9BZR9 551 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 ENKD1Q9H0I2 346 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 CHST11Q9NPF2 352 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 SDR39U1Q9NRG7 319 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-219ENST00000518824 CLCF1Q9UBD9 225 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 BTNL2Q9UIR0 455 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 MKLN1Q9UL63 735 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 PCDHGB4Q9UN71 923 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 HEATR5AQ86XA9 2040 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 FBN2P35556 2912 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 MAST4O15021 2626 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 MBD3L4A6NDZ8 208 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-219ENST00000518824 MBD3L3A6NE82 208 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-219ENST00000518824 CCDC154A6NI56 674 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 MBD3L5A6NJ08 208 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-219ENST00000518824 CD8B2A6NJW9 211 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 H3BML4 177 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 SCDO00767 359 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 UBDO15205 165 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 SEC14L5O43304 696 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 SLC22A3O75751 556 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 IDO1P14902 403 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 IGFBP2P18065 325 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 ATP6V1C1P21283 382 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 BMP5P22003 454 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 PTGER4P35408 488 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 TIMP3P35625 211 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 CLK3P49761 638 aaKnown RBP12.01□□□□□ -0.49
VEGFA-219ENST00000518824 ATP12AP54707 1039 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 GPR68Q15743 365 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 TOMM34Q15785 309 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-219ENST00000518824 DPY19L1Q2PZI1 675 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 PLPPR5Q32ZL2 321 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 ARHGAP11BQ3KRB8 267 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 PDZK1Q5T2W1 519 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 HEPHL1Q6MZM0 1159 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 AAGABQ6PD74 315 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 ENPP6Q6UWR7 440 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 MEX3BQ6ZN04 569 aaKnown RBP12.01□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF621Q6ZSS3 439 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 RNF130Q86XS8 419 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF614Q8N883 585 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 MBD3L2Q8NHZ7 208 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-219ENST00000518824 MIPOL1Q8TD10 442 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 DYDC1Q8WWB3 177 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 XAGE5Q8WWM1 108 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 VPS33AQ96AX1 596 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF845Q96IR2 970 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-219ENST00000518824 PANX1Q96RD7 426 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 KCNJ16Q9NPI9 418 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 MED17Q9NVC6 651 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 CARD8Q9Y2G2 431 aa12.01□□□□□ -0.49
VEGFA-219ENST00000518824 A0A1W2PQD3 144 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 HMGN4O00479 90 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 HCRTR2O43614 444 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 EFNA2O43921 213 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 UGT2B17O75795 530 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 KRT16P08779 473 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 COX6B1P14854 86 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 POU3F2P20265 443 aaPredicted RBP12□□□□□ -0.49
VEGFA-219ENST00000518824 PSMA4P25789 261 aaKnown RBP12□□□□□ -0.49
VEGFA-219ENST00000518824 MSX1P28360 303 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 SHC1P29353 583 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 LCN1P31025 176 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 CHI3L1P36222 383 aaPredicted RBP12□□□□□ -0.49
VEGFA-219ENST00000518824 AQP5P55064 265 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 KRTAP10-9P60411 292 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 PLAURQ03405 335 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 GANABQ14697 944 aaKnown RBP12□□□□□ -0.49
VEGFA-219ENST00000518824 MAPK11Q15759 364 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 GSTA3Q16772 222 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 TIGD2Q4W5G0 525 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 TYW3Q6IPR3 259 aaKnown RBP12□□□□□ -0.49
VEGFA-219ENST00000518824 GGNQ86UU5 652 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 FUNDC1Q8IVP5 155 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 GCNT2Q8N0V5 402 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 GOLGA6L1Q8N7Z2 621 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 ANKFN1Q8N957 763 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 VPS37AQ8NEZ2 397 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 RFWD2Q8NHY2 731 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 FIG4Q92562 907 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 AURKBQ96GD4 344 aaPredicted RBP12□□□□□ -0.49
VEGFA-219ENST00000518824 MAGEB18Q96M61 343 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 RNF145Q96MT1 663 aa12□□□□□ -0.49
VEGFA-219ENST00000518824 TREX2Q9BQ50 279 aaPredicted RBP12□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF350Q9GZX5 532 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms