RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PPP1R3EQ9H7J1 279 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 UCK1Q9HA47 277 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 MED17Q9NVC6 651 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 B3GNT2Q9NY97 397 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 P2RX2Q9UBL9 471 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 FBXW2Q9UKT8 454 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SF3B6Q9Y3B4 125 aaKnown RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 ZNF780BQ9Y6R6 833 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 NCOR1O75376 2440 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 OR6C70A6NIJ9 312 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 M0R129 80 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 NME6O75414 186 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 HLA-DPB1P04440 258 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 CELA2BP08218 269 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 AZGP1P25311 298 aaKnown RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 CERS1P27544 350 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 PPP2R1BP30154 601 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 TLX1P31314 330 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 KHKP50053 298 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 P2RX3P56373 397 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 RAB8AP61006 207 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 PRR5P85299 388 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 BDH1Q02338 343 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SRSF5Q13243 272 aaKnown RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 C1orf61Q13536 156 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 EFR3AQ14156 821 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SYT14P1Q58G82 188 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 PMS2CLQ68D20 193 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 RNF44Q7L0R7 432 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 HDDC2Q7Z4H3 204 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 OR10G6Q8NH81 332 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 BBS10Q8TAM1 723 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SLC38A5Q8WUX1 472 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 FGF11Q92914 225 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 RERGQ96A58 199 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 ZNF582Q96NG8 517 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 UBL7Q96S82 380 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 LRRC61Q9BV99 259 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 KATNB1Q9BVA0 655 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 BCL2L10Q9HD36 194 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 HRASLS2Q9NWW9 162 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 C5AR2Q9P296 337 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SLC6A14Q9UN76 642 aa17.06■□□□□ 0.32
SDC2-202ENST00000518385 SPIN1Q9Y657 262 aaPredicted RBP17.06■□□□□ 0.32
SDC2-202ENST00000518385 MDC1Q14676 2089 aaKnown RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 HMGN4O00479 90 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 TFECO14948 347 aaPredicted RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 PGRMC2O15173 223 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 CASC3O15234 703 aaKnown RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 HRO43593 1189 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 B3GALT2O43825 422 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 FHP07954 510 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 ZNF888P0CJ79 500 aaPredicted RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 GIPRP48546 466 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 DAB2P98082 770 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 MRPL28Q13084 256 aaKnown RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 ELOCQ15369 112 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 SNAP47Q5SQN1 464 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 LYSMD4Q5XG99 296 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 ARMC6Q6NXE6 501 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 FAM109AQ8N4B1 249 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 GPR32P1Q8NGA4 272 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 ZDHHC1Q8WTX9 485 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 KCTD12Q96CX2 325 aaKnown RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 TRMT61AQ96FX7 289 aaKnown RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 TMEM19Q96HH6 336 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 KCNJ15Q99712 375 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 MACROD1Q9BQ69 325 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 TMEM43Q9BTV4 400 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 LYRM4Q9HD34 91 aa17.05■□□□□ 0.32
SDC2-202ENST00000518385 ZCCHC3Q9NUD5 404 aaKnown RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 ARHGEF17Q96PE2 2063 aaPredicted RBP17.05■□□□□ 0.32
SDC2-202ENST00000518385 FAM240BA0A1B0GVZ2 78 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 OR5K3A6NET4 321 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 LYRM1O43325 122 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 EMC8O43402 210 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 CTSVO60911 334 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 ERAL1O75616 437 aaKnown RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 TP53P04637 393 aaPredicted RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 CD53P19397 219 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 DHPSP49366 369 aaPredicted RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 EVX1P49640 407 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 CASP9P55211 416 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 RRAS2P62070 204 aaPredicted RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 HHEXQ03014 270 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 TATDN3Q17R31 274 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 SIGIRRQ6IA17 410 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 C22orf42Q6IC83 251 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 TNFAIP8L2Q6P589 184 aaPredicted RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 BMP8AQ7Z5Y6 402 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 Q8N402 240 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 KCT2Q8NC54 265 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 GNPDA2Q8TDQ7 276 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 UBASH3BQ8TF42 649 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 DNAJA4Q8WW22 397 aaPredicted RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 CNRIP1Q96F85 164 aaPredicted RBP17.04■□□□□ 0.32
SDC2-202ENST00000518385 ZNF681Q96N22 645 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 ARHGAP9Q9BRR9 750 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 FNDC11Q9BVV2 318 aa17.04■□□□□ 0.32
SDC2-202ENST00000518385 IRF2BPLQ9H1B7 796 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms