RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 EML5Q05BV3 1969 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 GOLGA8DPQ0D2H9 430 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 BRD3Q15059 726 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 PPA1Q15181 289 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 BAK1Q16611 211 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 MEA1Q16626 185 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 UGCGQ16739 394 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 FAM174BQ3ZCQ3 159 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CCDC38Q502W7 563 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 GPAT3Q53EU6 434 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 LACTB2Q53H82 288 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 VAX1Q5SQQ9 334 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 AMMECR1LQ6DCA0 310 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CTRB2Q6GPI1 263 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 ACSM5Q6NUN0 579 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 ENOSF1Q7L5Y1 443 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CHST3Q7LGC8 479 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 WDR49Q8IV35 697 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CPOQ8IVL8 374 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 LINC01560Q8TB33 94 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 LPGAT1Q92604 370 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 C19orf43Q9BQ61 176 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 RHOXF2Q9BQY4 288 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CRB3Q9BUF7 120 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 RNF126Q9BV68 326 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 FTOQ9C0B1 505 aaKnown RBP eCLIP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CYSTM1Q9H1C7 97 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 MTIF3Q9H2K0 278 aaKnown RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 UNC45AQ9H3U1 944 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 NIT2Q9NQR4 276 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 PNO1Q9NRX1 252 aaKnown RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 GPATCH2LQ9NWQ4 482 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 TMOD3Q9NYL9 352 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 CNOT2Q9NZN8 540 aaKnown RBP-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 VPS54Q9P1Q0 977 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 DCDC2Q9UHG0 476 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 UGT2A1Q9Y4X1 527 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 KCNE2Q9Y6J6 123 aa-2.04□□□□□ -2.74
RNU6-539P-201ENST00000516665 HEG1Q9ULI3 1381 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 IGHV3-66A0A0C4DH42 116 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 SMIM28A0A1B0GU29 152 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 A0A1B0GUL7 405 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 A0A1W2PNM2 257 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 PTGESO14684 152 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 KIAA0513O60268 411 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 CNMDO75829 334 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 GZMAP12544 262 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 TDGF1P13385 188 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 ABCD3P28288 659 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 RGS2P41220 211 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 MATR3P43243 847 aaKnown RBP eCLIP-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 TDGF1P3P51864 188 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 METAP1P53582 386 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 FOLH1Q04609 750 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF763Q0D2J5 394 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 AP1B1Q10567 949 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 CEACAM7Q14002 265 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 MED22Q15528 200 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 MEDAGQ5VYS4 303 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF470Q6ECI4 717 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 DHRS7BQ6IAN0 325 aaPredicted RBP-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZFP1Q6P2D0 407 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 TOM1L2Q6ZVM7 507 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 MAATS1Q7Z4T9 603 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 PHLDB2Q86SQ0 1253 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 TRIM69Q86WT6 500 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 NKAPP1Q8N9T2 125 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 OR13G1Q8NGZ3 307 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 METTL6Q8TCB7 284 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 VPS39Q96JC1 886 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF160Q9HCG1 818 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 HOXC10Q9NYD6 342 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 STK26Q9P289 416 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 EMCNQ9ULC0 261 aa-2.05□□□□□ -2.74
RNU6-539P-201ENST00000516665 TRGV2A0A075B6R0 118 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 A0A0U1RQG5 324 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF716A6NP11 495 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CTAGE5O15320 804 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CPSF4O95639 269 aaKnown RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 OLFM2O95897 454 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 OPN1MWP04001 364 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CD74P04233 296 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 ASGR1P07306 291 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 OPN1MW2P0DN77 364 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 OPN1MW3P0DN78 364 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 UBL4AP11441 157 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 ICAM2P13598 275 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 HOXB8P17481 243 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 GZMHP20718 246 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 SSTR1P30872 391 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 SRD5A2P31213 254 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 SAA4P35542 130 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 OR3A3P47888 321 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 RPL29P47914 159 aaKnown RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CCL23P55773 120 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 MRPS11P82912 194 aaKnown RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 PLOD1Q02809 727 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 KCNJ11Q14654 390 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 DNM1P46Q6ZS02 220 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 BIVMQ86UB2 503 aa-2.06□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms