RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 KLHL22Q53GT1 634 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 GRHL2Q6ISB3 625 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 CLEC2AQ6UVW9 174 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 Q6ZSR6 202 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 HSD11B1LQ7Z5J1 315 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 KLBQ86Z14 1044 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 CLECL1Q8IZS7 167 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 NAGSQ8N159 534 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 CARFQ8N187 725 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 OR9Q2Q8NGE9 314 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 OR56A3Q8NH54 315 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 ORAI1Q96D31 301 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF582Q96NG8 517 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-205ENST00000514271 OR2M4Q96R27 311 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 MENTQ9BUN1 341 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 C6orf62Q9GZU0 229 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-205ENST00000514271 NMNAT1Q9HAN9 279 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-205ENST00000514271 ASB6Q9NWX5 421 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 EPHA6Q9UF33 1036 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 MSRB2Q9Y3D2 182 aa6.9□□□□□ -1.3
CLIP1-205ENST00000514271 A0A1W2PQL4 384 aaPredicted RBP6.9□□□□□ -1.31
CLIP1-205ENST00000514271 KRT87PA6NCN2 255 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 FURINP09958 794 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 LAMP1P11279 417 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF7P17097 686 aaPredicted RBP6.9□□□□□ -1.31
CLIP1-205ENST00000514271 MST1P26927 711 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 GKP32189 559 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 MC4RP32245 332 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 SOX18P35713 384 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 NSG1P42857 185 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 PPP3R1P63098 170 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 SPHARQ15513 63 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 FAM122CQ6P4D5 195 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 ADGRF3Q8IZF5 1079 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF565Q8N9K5 539 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 KLHL6Q8WZ60 621 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 IL26Q9NPH9 171 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 PCOLCE2Q9UKZ9 415 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 ACSL5Q9ULC5 683 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 SAMHD1Q9Y3Z3 626 aaKnown RBP6.9□□□□□ -1.31
CLIP1-205ENST00000514271 TRPM6Q9BX84 2022 aa6.9□□□□□ -1.31
CLIP1-205ENST00000514271 MAGEB17A8MXT2 336 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 LMO7DNF2Z398 122 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 WWP2O00308 870 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 FOXE1O00358 373 aaPredicted RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CCNB2O95067 398 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 OR5F1O95221 314 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CLDN7O95471 211 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CLDN9O95484 217 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CFIP05156 583 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 HPGDP15428 266 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 ALOX12P18054 663 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CCR7P32248 378 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 MAP2K3P46734 347 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 HSPA7P48741 367 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GBX2P52951 348 aaPredicted RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 FXYD6P3P58550 94 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 RPS25P62851 125 aaKnown RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 FGL2Q14314 439 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GPR176Q14439 515 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 NR6A1Q15406 480 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 SPANXN2Q5MJ10 180 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 B3GNTL1Q67FW5 361 aaPredicted RBP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 WDR73Q6P4I2 378 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 LRRTM4Q86VH4 590 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 UFD1Q92890 307 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 KCNS3Q9BQ31 491 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 DPY30Q9C005 99 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 LHX9Q9NQ69 397 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GLRX2Q9NS18 164 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 COA4Q9NYJ1 87 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CLEC4AQ9UMR7 237 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 MAPRE3Q9UPY8 281 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CORO2BQ9UQ03 480 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 KIR2DS5A0A0G2JLQ3 304 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 A0A0G2JNG1 304 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 SLC22A23A1A5C7 686 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 KIR2DS3K7RE56 304 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 M0R129 80 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 LRRTM2O43300 516 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PRKYO43930 277 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 THY1P04216 161 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 OR56A5P0C7T3 313 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 CXCL3P19876 107 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 MTNR1BP49286 362 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 HNMTP50135 292 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 ILF3Q12906 894 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLIP1-205ENST00000514271 KIR2DS5Q14953 304 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GRK1Q15835 563 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 RBBP7Q16576 425 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF425Q6IV72 752 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 OGFOD3Q6PK18 319 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 KANSL1Q7Z3B3 1105 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PDZD3Q86UT5 571 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 NXPE1Q8N323 547 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GPBAR1Q8TDU6 330 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 PGLYRP3Q96LB9 341 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 COPS8Q99627 209 aa6.89□□□□□ -1.31
CLIP1-205ENST00000514271 GFI1Q99684 422 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms