RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 SKA3Q8IX90 412 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 TPRX1Q8N7U7 411 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 MDS2Q8NDY4 140 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 NEIL3Q8TAT5 605 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 DNAJA4Q8WW22 397 aaPredicted RBP2.94□□□□□ -1.94
PDE4D-221ENST00000514231 TRUB1Q8WWH5 349 aaKnown RBP2.94□□□□□ -1.94
PDE4D-221ENST00000514231 RDH5Q92781 318 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 ELMO2Q96JJ3 720 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 WRAP53Q9BUR4 548 aaKnown RBP2.94□□□□□ -1.94
PDE4D-221ENST00000514231 NMNAT2Q9BZQ4 307 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 COMMD4Q9H0A8 199 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 SIRPDQ9H106 197 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 VCXQ9H320 206 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 NTN4Q9HB63 628 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 GDAP2Q9NXN4 497 aa2.94□□□□□ -1.94
PDE4D-221ENST00000514231 PTCH1Q13635 1447 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 A0A1W2PQ67 120 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 NPIPB7O75200 414 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 CSF2P04141 144 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 ABHD2P08910 425 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 H2AFXP16104 143 aaPredicted RBP2.93□□□□□ -1.94
PDE4D-221ENST00000514231 HTR5AP47898 357 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 GFPT1Q06210 699 aaPredicted RBP2.93□□□□□ -1.94
PDE4D-221ENST00000514231 SYPL1Q16563 259 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 ARSKQ6UWY0 536 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 OR1E3Q8WZA6 343 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 ATP6V1E2Q96A05 226 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 ARHGDIGQ99819 225 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 SLC17A9Q9BYT1 436 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 RIMS3Q9UJD0 308 aa2.93□□□□□ -1.94
PDE4D-221ENST00000514231 UBQLN1Q9UMX0 589 aaKnown RBP2.93□□□□□ -1.94
PDE4D-221ENST00000514231 A8MUA0 341 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 K7N7A8 449 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 CASKO14936 926 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 HMOX1P09601 288 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 AQP1P29972 269 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 AXLP30530 894 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 PMELP40967 661 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 GNPDA1P46926 289 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 CSNK1DP48730 415 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 SLC39A4Q6P5W5 647 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 WDR74Q6RFH5 385 aaPredicted RBP2.92□□□□□ -1.94
PDE4D-221ENST00000514231 FAM220AQ7Z4H9 259 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 HSD11B1LQ7Z5J1 315 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 CCDC91Q7Z6B0 441 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 ADAMTSL2Q86TH1 951 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 SAXO1Q8IYX7 474 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 FAM71E2Q8N5Q1 922 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 TBC1D10AQ9BXI6 508 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 CHIAQ9BZP6 476 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 TRPV5Q9NQA5 729 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 NECAP2Q9NVZ3 263 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 CWC25Q9NXE8 425 aaPredicted RBP2.92□□□□□ -1.94
PDE4D-221ENST00000514231 ZNF225Q9UK10 706 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 GAKO14976 1311 aa2.92□□□□□ -1.94
PDE4D-221ENST00000514231 NKX2-6A6NCS4 301 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 KINO60870 393 aaKnown RBP2.91□□□□□ -1.94
PDE4D-221ENST00000514231 AKR7A3O95154 331 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 RCC1P18754 421 aaPredicted RBP2.91□□□□□ -1.94
PDE4D-221ENST00000514231 CTNNA1P35221 906 aaKnown RBP2.91□□□□□ -1.94
PDE4D-221ENST00000514231 PAX5Q02548 391 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 TFDP1Q14186 410 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 TOR1AIP1Q5JTV8 583 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 OR8G2PQ6IF36 304 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 ARMCX2Q7L311 632 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 LINC01551Q86U37 167 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 TICAM2Q86XR7 235 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 EXOC6Q8TAG9 804 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 VMP1Q96GC9 406 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 FEM1AQ9BSK4 669 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 SRXN1Q9BYN0 137 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 PPDPFQ9H3Y8 114 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 RPAP3Q9H6T3 665 aaPredicted RBP2.91□□□□□ -1.94
PDE4D-221ENST00000514231 MID1IP1Q9NPA3 183 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 PRPF19Q9UMS4 504 aaKnown RBP2.91□□□□□ -1.94
PDE4D-221ENST00000514231 MAB21L2Q9Y586 359 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 USP16Q9Y5T5 823 aa2.91□□□□□ -1.94
PDE4D-221ENST00000514231 A6NDX4 124 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 DLGAP1O14490 977 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 INSP01308 110 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 CXCL10P02778 98 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 MMP1P03956 469 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 TSPAN8P19075 237 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 CCNCP24863 283 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 LHX2P50458 406 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 NOVA1P51513 510 aaKnown RBP2.9□□□□□ -1.95
PDE4D-221ENST00000514231 RPA4Q13156 261 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 C1orf186Q6ZWK4 172 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 CYS1Q717R9 158 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 LRRC70Q7Z2Q7 622 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 ZNF429Q86V71 674 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 IQCA1Q86XH1 822 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 Q8N9W7 124 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 ZSCAN4Q8NAM6 433 aaPredicted RBP2.9□□□□□ -1.95
PDE4D-221ENST00000514231 OR2T33Q8NG76 320 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 SPATA13Q96N96 652 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 TMEM121Q9BTD3 319 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 NFKBIZQ9BYH8 718 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 KCNN3Q9UGI6 736 aa2.9□□□□□ -1.95
PDE4D-221ENST00000514231 DNPEPQ9ULA0 475 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms