RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	PNPLA6	Q8IY17	1366 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TTC5	Q8N0Z6	440 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	LINC01561	Q8N1V8	128 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	DHRSX	Q8N5I4	330 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	PRSS33	Q8NF86	280 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	OR5L2	Q8NGL0	311 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	SLC2A14	Q8TDB8	520 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	ATF6B	Q99941	703 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	BARHL1	Q9BZE3	327 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	NCOR1P1	Q9H4R4	102 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	MEPE	Q9NQ76	525 aa	Predicted RBP	4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	NUDT4	Q9NZJ9	180 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	OARD1	Q9Y530	152 aa		4.08	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	IGHV3OR16-12	A0A075B7B8	117 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	FOXE1	O00358	373 aa	Predicted RBP	4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	NBR2	O15453	112 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TAPBP	O15533	448 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	WBP4	O75554	376 aa	Known RBP	4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TSPAN12	O95859	305 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TRIM49	P0CI25	452 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TRIM49C	P0CI26	452 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	MMP11	P24347	488 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	LMO2	P25791	158 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	SSR1	P43307	286 aa	Known RBP	4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	RPL8	P62917	257 aa	Known RBP	4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	ACY1	Q03154	408 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	PLD1	Q13393	1074 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	PCK2	Q16822	640 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	SFT2D3	Q587I9	215 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CTSL3P	Q5NE16	218 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	PDZK1	Q5T2W1	519 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	LGSN	Q5TDP6	509 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	MEDAG	Q5VYS4	303 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	EMB	Q6PCB8	327 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	RFWD3	Q6PCD5	774 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	VIT	Q6UXI7	678 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CDR2L	Q86X02	465 aa	Predicted RBP	4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CCDC50	Q8IVM0	306 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CLEC4F	Q8N1N0	589 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	C15orf54	Q8N8G6	183 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	FLVCR1-AS1	Q8TAF5	88 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	NPRL2	Q8WTW4	380 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	SCFD1	Q8WVM8	642 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	MAIP1	Q8WWC4	291 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	IL1F10	Q8WWZ1	152 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	GTF3A	Q92664	365 aa	Known RBP	4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	FAHD2A	Q96GK7	314 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	SLC45A3	Q96JT2	553 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	COPS8	Q99627	209 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CHCHD5	Q9BSY4	110 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TSSK1B	Q9BXA7	367 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	PARD6B	Q9BYG5	372 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	FGFBP2	Q9BYJ0	223 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	AMBN	Q9NP70	447 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	POLE4	Q9NR33	117 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	RAB20	Q9NX57	234 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	IL36G	Q9NZH8	169 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	NTNG1	Q9Y2I2	539 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	IFT52	Q9Y366	437 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TIMM10B	Q9Y5J6	103 aa		4.07	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TDRD15	B5MCY1	1934 aa	Known RBP	4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006		A0A1B0GVL5	298 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	BTBD17	A6NE02	478 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006		A8MXK9	166 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	PRSS44	E7EML9	344 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	NDUFB10	O96000	172 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	PGK1	P00558	417 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CFC1B	P0CG36	223 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CFC1	P0CG37	223 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	IMPDH1	P20839	514 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	IGFBP5	P24593	272 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	EPS15	P42566	896 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	GSK3B	P49841	420 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	EFNB2	P52799	333 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	PRRX1	P54821	245 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	RND3	P61587	244 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	RAB40B	Q12829	278 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	IL18R1	Q13478	541 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	C1orf61	Q13536	156 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	LY6D	Q14210	128 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	NDUFA9	Q16795	377 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CYP51A1	Q16850	503 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TMEM44	Q2T9K0	475 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TP53I3	Q53FA7	332 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	VWA2	Q5GFL6	755 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	BEND3	Q5T5X7	828 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	ARMC12	Q5T9G4	340 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	TGIF2LX	Q8IUE1	241 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	MFSD9	Q8NBP5	474 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	BAD	Q92934	168 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	C9orf85	Q96MD7	179 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	OR5B2	Q96R09	309 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CHRDL1	Q9BU40	450 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	CCDC28B	Q9BUN5	200 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	FAM192A	Q9GZU8	254 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	IKZF5	Q9H5V7	419 aa		4.06	□□□□□ -1.76
CALCOCO2-222	ENST00000514006	EXOSC3	Q9NQT5	275 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms