RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ADRM1Q16186 407 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 CMPK2Q5EBM0 449 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 TMEM81Q6P7N7 255 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 LRRC74BQ6ZQY2 392 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 YRDCQ86U90 279 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 IFNEQ86WN2 208 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 SIAH3Q8IW03 269 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 TMCO5AQ8N6Q1 288 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 RNF148Q8N7C7 305 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 OR2M3Q8NG83 312 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 OR4K17Q8NGC6 315 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 OR8J3Q8NGG0 315 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 OR5M1Q8NGP8 315 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 OR1J4Q8NGS1 313 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 DNAJB8Q8NHS0 232 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 DUSP19Q8WTR2 217 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 FAR1Q8WVX9 515 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 RELTQ969Z4 430 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 NTNG2Q96CW9 530 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 TRNT1Q96Q11 434 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 TREX2Q9BQ50 279 aaPredicted RBP8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 GPATCH1Q9BRR8 931 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 DSN1Q9H410 356 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 KAT8Q9H7Z6 458 aaKnown RBP8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 EFCAB1Q9HAE3 211 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 ZFP64Q9NPA5 681 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 CORO2BQ9UQ03 480 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 LIPT1Q9Y234 373 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 CARD8Q9Y2G2 431 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF462Q96JM2 2506 aa8.93□□□□□ -0.98
TOPBP1-209ENST00000513818 DSPPQ9NZW4 1301 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SERINC4A6NH21 518 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 HCRTR2O43614 444 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 TRAPPC6AO75865 159 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SNX4O95219 450 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 CRYABP02511 175 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 OPN1SWP03999 348 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 NGFRP08138 427 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 UBTFL6P0CB48 400 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 UBL4AP11441 157 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 ESRRAP11474 423 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 CLK3P49761 638 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 GZMMP51124 257 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 MRPL49Q13405 166 aaKnown RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SNTA1Q13424 505 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 KRT72Q14CN4 511 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF141Q15928 474 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 KLHL26Q53HC5 615 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 EIPR1Q53HC9 387 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 WIPI1Q5MNZ9 446 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF324BQ6AW86 544 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 TIGD3Q6B0B8 471 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 C8orf82Q6P1X6 216 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 CBLN3Q6UW01 205 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF836Q6ZNA1 936 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 RINLQ6ZS11 566 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 TRPM8Q7Z2W7 1104 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 NET1Q7Z628 596 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 COMTD1Q86VU5 262 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC22A16Q86VW1 577 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 CALHM3Q86XJ0 350 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 PLCZ1Q86YW0 608 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC15A3Q8IY34 581 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 FAM109AQ8N4B1 249 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF527Q8NB42 609 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 ANKK1Q8NFD2 765 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 OR52P1PQ8NH57 321 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 BBS10Q8TAM1 723 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 WDR60Q8WVS4 1066 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 GPR137Q96N19 417 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 NPAS1Q99742 590 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SLX1AQ9BQ83 275 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 ECSITQ9BQ95 431 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 RSPO3Q9BXY4 272 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SAP130Q9H0E3 1048 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 TMEM38AQ9H6F2 299 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 PLA2G2EQ9NZK7 142 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SPRR3Q9UBC9 169 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 B4GALT7Q9UBV7 327 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 DKKL1Q9UK85 242 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 VDAC3Q9Y277 283 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF443Q9Y2A4 671 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 RPH3AQ9Y2J0 694 aaPredicted RBP8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 SLC6A5Q9Y345 797 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 DTNAQ9Y4J8 743 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 GMEB1Q9Y692 573 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 PCNX3Q9H6A9 2034 aa8.92□□□□□ -0.98
TOPBP1-209ENST00000513818 A0A1W2PQD3 144 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 TMEM247A6NEH6 219 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 AGAP5A6NIR3 686 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 FAM220BPB1ANY3 271 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 AP3D1O14617 1153 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 FRS3O43559 492 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ADAM11O75078 769 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 WISP1O95388 367 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 PGM3O95394 542 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 CSTAP01040 98 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 FREM3P0C091 2139 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 T-ENOLP0DO92 83 aa8.91□□□□□ -0.98
TOPBP1-209ENST00000513818 ENDOUP21128 410 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms