RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SYPL2Q5VXT5 272 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 ZNF770Q6IQ21 691 aaPredicted RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 RWDD4Q6NW29 188 aaKnown RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 CDHR3Q6ZTQ4 885 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 C5orf24Q7Z6I8 188 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 ASPGQ86U10 573 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 SLC47A2Q86VL8 602 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 ZC3H3Q8IXZ2 948 aaKnown RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 SMPDL3AQ92484 453 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 PRCCQ92733 491 aaPredicted RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 ATXN7L3BQ96GX2 97 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 HSFY1Q96LI6 401 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 LURAP1Q96LR2 239 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 RPRD1AQ96P16 312 aaPredicted RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 ZNF300Q96RE9 604 aaPredicted RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 OMDQ99983 421 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 SYT11Q9BT88 431 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 TRIM62Q9BVG3 475 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 GPR174Q9BXC1 333 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 NUSAP1Q9BXS6 441 aaKnown RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 STRADBQ9C0K7 418 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 DDX47Q9H0S4 455 aaKnown RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 FAM124BQ9H5Z6 455 aaPredicted RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 POPDC2Q9HBU9 364 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 PRMT8Q9NR22 394 aaPredicted RBP3.57□□□□□ -1.84
HTT-210ENST00000512909 DDIT4Q9NX09 232 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.57□□□□□ -1.84
HTT-210ENST00000512909 CLEC4EQ9ULY5 219 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 AUP1Q9Y679 476 aa3.57□□□□□ -1.84
HTT-210ENST00000512909 VWA8A3KMH1 1905 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 ATG2AQ2TAZ0 1938 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 A0A0A6YYC8 382 aaPredicted RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 H7C423 109 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 I3L1I5 382 aaPredicted RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 EEF2KO00418 725 aaKnown RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 TRAFD1O14545 582 aaPredicted RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 IDH3BO43837 385 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CACNG3O60359 315 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 ADCY5O95622 1261 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 IL1BP01584 269 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CCDC172P0C7W6 258 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 UCHL3P15374 230 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CYP11B1P15538 503 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 GNSP15586 552 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CD1DP15813 335 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 DESP17661 470 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 GABRG2P18507 467 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 BCKDHBP21953 392 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 FCGR2BP31994 310 aaPredicted RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 FCGR2CP31995 323 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CCR1P32246 355 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CD70P32970 193 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 SGSHP51688 502 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 RIDAP52758 137 aaKnown RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 GEMP55040 296 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 RPS24P62847 133 aaKnown RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 MYL5Q02045 173 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 ZNF33AQ06730 810 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 SPHARQ15513 63 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CARTPTQ16568 116 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 POM121L1PQ3SYA9 428 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 AARDQ4LEZ3 155 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 RABGAP1LQ5R372 815 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 FAM183BPQ6ZVS7 135 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 NOTCH2NLQ7Z3S9 236 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 PRSS42Q7Z5A4 293 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 TMEM110Q86TL2 294 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 TAC4Q86UU9 113 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 NLRP14Q86W24 1093 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 RNF130Q86XS8 419 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 HDDC3Q8N4P3 179 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 ARL10Q8N8L6 244 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 NAT8LQ8N9F0 302 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 SPPL2AQ8TCT8 520 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 DQX1Q8TE96 717 aaKnown RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 SETD7Q8WTS6 366 aaKnown RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 HAS2Q92819 552 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 TCEAL3Q969E4 200 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 SLC45A3Q96JT2 553 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 BTN2A3PQ96KV6 586 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 POM121L2Q96KW2 1035 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 SERPINB11Q96P15 392 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CPXM1Q96SM3 734 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 PSMB7Q99436 277 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 CCM2Q9BSQ5 444 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 NUP58Q9BVL2 599 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 AKAP7Q9P0M2 348 aaPredicted RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 MDFICQ9P1T7 246 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 THAP10Q9P2Z0 257 aaPredicted RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 CYTH4Q9UIA0 394 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 GGA2Q9UJY4 613 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 MRTO4Q9UKD2 239 aaKnown RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 VANGL2Q9ULK5 521 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 STAP1Q9ULZ2 295 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 MGAT4AQ9UM21 535 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 ERVW-1Q9UQF0 538 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 TDRKHQ9Y2W6 561 aaKnown RBP3.56□□□□□ -1.84
HTT-210ENST00000512909 SNX10Q9Y5X0 201 aa3.56□□□□□ -1.84
HTT-210ENST00000512909 MYO10Q9HD67 2058 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms