RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MAS1P04201 325 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 GYPCP04921 128 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ARSAP15289 507 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 MMP15P51511 669 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 TAS2R30P59541 319 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZNF45Q02386 682 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 POU4F2Q12837 409 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 CST9LP1Q5W188 147 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 MEX3DQ86XN8 651 aaKnown RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 ADGRF3Q8IZF5 1079 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 SYT14Q8NB59 555 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 OR52P1PQ8NH57 321 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 TMEM203Q969S6 136 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 MOB3AQ96BX8 217 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 TIMP4Q99727 224 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 CHST11Q9NPF2 352 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 COL20A1Q9P218 1284 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 DRGXA6NNA5 263 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZNF705FA8MVS1 300 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 ACOT8O14734 319 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 SMAD7O15105 426 aaKnown RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 IGHG1P01857 330 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZNF705DP0CH99 300 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 ZNF705BP0CI00 300 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 CDK4P11802 303 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 MSX2P35548 267 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 ACVRL1P37023 503 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 FABP6P51161 128 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 NTHL1P78549 312 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 EXT1Q16394 746 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 GSG1LQ6UXU4 331 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 PHF7Q9BWX1 381 aaPredicted RBP8.43□□□□□ -1.06
VCAN-208ENST00000512590 AGXT2Q9BYV1 514 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 MFFQ9GZY8 342 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 PNPOQ9NVS9 261 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 TAS2R16Q9NYV7 291 aa8.43□□□□□ -1.06
VCAN-208ENST00000512590 GMDSO60547 372 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 RBBP9O75884 186 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ONECUT2O95948 504 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 F7P08709 466 aaPredicted RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 UBL4AP11441 157 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 CHRNB2P17787 502 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ACTC1P68032 377 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ACTA1P68133 377 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 PHC1P78364 1004 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 OR8G1Q15617 311 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 FHL5Q5TD97 284 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 SLC22A10Q63ZE4 541 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ZNF425Q6IV72 752 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 DOK3Q7L591 496 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 AQP11Q8NBQ7 271 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 MYO5CQ9NQX4 1742 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 COCHO43405 550 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 CCNKO75909 580 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 DNASE1P24855 282 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 HTR2AP28223 471 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 SOX18P35713 384 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 CLDN17P56750 224 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 RPL26P61254 145 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 RPS18P62269 152 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 ZNF252P-AS1Q0IIN9 211 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 TMEM119Q4V9L6 283 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ZNF439Q8NDP4 499 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 SLC7A6Q92536 515 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 DCUN1D4Q92564 292 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 FAM173AQ9BQD7 235 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 RAB1BQ9H0U4 201 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ESRP2Q9H6T0 727 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 CLK4Q9HAZ1 481 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 MAGEE1Q9HCI5 957 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 TEX10Q9NXF1 929 aaPredicted RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 RPL26L1Q9UNX3 145 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 H3BNC9 293 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 EDF1O60869 148 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 RAP2AP10114 183 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 IDH3GP51553 393 aaPredicted RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 ARSDP51689 593 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 RAP2BP61225 183 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ERVK-25P63136 954 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 GPLD1P80108 840 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ARHGAP8P85298 464 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 RELBQ01201 579 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 BATFQ16520 125 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 TMEM184AQ6ZMB5 413 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 USP43Q70EL4 1123 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 CCDC28AQ8IWP9 274 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 OR2M7Q8NG81 312 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 SMAP2Q8WU79 429 aaPredicted RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 RTP4Q96DX8 246 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 MS4A7Q9GZW8 240 aaPredicted RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 CLEC5AQ9NY25 188 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 MRPL15Q9P015 296 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 ZNF346Q9UL40 294 aaKnown RBP8.42□□□□□ -1.06
VCAN-208ENST00000512590 PTPRUQ92729 1446 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 GXYLT2A0PJZ3 443 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 FAM181BA6NEQ2 426 aa8.42□□□□□ -1.06
VCAN-208ENST00000512590 ZNF716A6NP11 495 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms