RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ERVK11-1P61568 191 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 MRPS25P82663 173 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 SLC3A1Q07837 685 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 ZNF100Q8IYN0 542 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 FAM71AQ8IYT1 594 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 DCP1BQ8IZD4 617 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 CDRT4Q8N9R6 151 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 LINC01356Q8N9X3 169 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 ADAD2Q8NCV1 583 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 OR1J2Q8NGS2 313 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 HMGCLL1Q8TB92 370 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 GIPC3Q8TF64 312 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 HAS1Q92839 578 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 MTBPQ96DY7 904 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 VSTM2LQ96N03 204 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 ZNF582Q96NG8 517 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 FUNDC2Q9BWH2 189 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 PLA2G12BQ9BX93 195 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 METTL9Q9H1A3 318 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 UPF3AQ9H1J1 476 aaKnown RBP5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 CYSLTR2Q9NS75 346 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 ZNF701Q9NV72 531 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 PARVAQ9NVD7 372 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 IFNKQ9P0W0 207 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 PLEKHB1Q9UF11 243 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 OR14J1Q9UGF5 321 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 BCAP29Q9UHQ4 241 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 ACSL5Q9ULC5 683 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 GSTK1Q9Y2Q3 226 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 V9GYQ6 96 aa5.74□□□□□ -1.49
TRAPPC11-209ENST00000512476 UBN2Q6ZU65 1347 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CDC14CA4D256 554 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CCT8L1PA6NM43 557 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 EFNA2O43921 213 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 DEXIO95424 95 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 MOCS2O96007 188 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 FOSL2P15408 326 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CBR1P16152 277 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 RAB4AP20338 218 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 BMP5P22003 454 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 DTYMKP23919 212 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 MAGEA5P43359 124 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 KCNK10P57789 538 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 PITPNAQ00169 270 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CHRNB3Q05901 458 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 TATDN3Q17R31 274 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 MEDAGQ5VYS4 303 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 PRR27Q6MZM9 219 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 TTLL10Q6ZVT0 673 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 TRMT1LQ7Z2T5 733 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 MAVSQ7Z434 540 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 ADHFE1Q8IWW8 467 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 PELI3Q8N2H9 469 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 ASB10Q8WXI3 467 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 LMLNQ96KR4 655 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 ZNF578Q96N58 590 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CLIC6Q96NY7 704 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 PRR25Q96S07 402 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 P2RY13Q9BPV8 354 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 GID8Q9NWU2 228 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 FLRT1Q9NZU1 646 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 ZFR2Q9UPR6 939 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 A3GALT2U3KPV4 340 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 TAF1LQ8IZX4 1826 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 TUBGCP6Q96RT7 1819 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 USP42Q9H9J4 1324 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CNTNAP2Q9UHC6 1331 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 SCN7AQ01118 1682 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 LRRC3CA6NJW4 275 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 RAB29O14966 203 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CLOCKO15516 846 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CFLARO15519 480 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 FCN3O75636 299 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 OAZ2O95190 189 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 TNFAIP8O95379 198 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 OXSR1O95747 527 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 RFPL3SP0C7P2 107 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 PGAM1P18669 254 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 STX2P32856 288 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 GZMKP49863 264 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 DUSP3P51452 185 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 HMGCS2P54868 508 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 PKNOX1P55347 436 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CTTNQ14247 550 aaKnown RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 ZNF268Q14587 947 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 KIF19Q2TAC6 998 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 ESCO2Q56NI9 601 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 C3orf33Q6P1S2 294 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 EMBQ6PCB8 327 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 CD300LGQ6UXG3 332 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 ZNF562Q6V9R5 426 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 FAM222BQ8WU58 562 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 R3HDM4Q96D70 268 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 GRAMD2BQ96HH9 432 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 ZNF597Q96LX8 424 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 OR5B2Q96R09 309 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 MBOAT4Q96T53 435 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 NICN1Q9BSH3 213 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 TM6SF1Q9BZW5 370 aa5.73□□□□□ -1.49
TRAPPC11-209ENST00000512476 GBA3Q9H227 469 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms