RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 SCN3AQ9NY46 2000 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 OTOGLQ3ZCN5 2332 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 C2orf92A0A1B0GVN3 265 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 HTR3EA5X5Y0 456 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 PRAMEF25A6NGN4 478 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 SAC3D1A6NKF1 404 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 hCG_2039718K7EN88 272 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 TNFRSF11BO00300 401 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 UGT2B17O75795 530 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 KLF7O75840 302 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-230ENST00000511944 OR5F1O95221 314 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 GADD45GO95257 159 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 MT-ND1P03886 318 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 NME2P22392 152 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 MMP11P24347 488 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 RRM2P31350 389 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 KRT20P35900 424 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 FOLR3P41439 243 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 TMED10P49755 219 aaKnown RBP8.39□□□□□ -1.07
NR1I3-230ENST00000511944 EFNA3P52797 238 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 PNLIPRP2P54317 469 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 NRG3P56975 720 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 IL18R1Q13478 541 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 MED21Q13503 144 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 EFR3AQ14156 821 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 FGFBP1Q14512 234 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 NHSL2Q5HYW2 709 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 TTC23Q5W5X9 447 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 KDM4DQ6B0I6 523 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 PAPD4Q6PIY7 484 aaKnown RBP8.39□□□□□ -1.07
NR1I3-230ENST00000511944 NPSR1Q6W5P4 371 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 HSDL2Q6YN16 418 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 SLCO6A1Q86UG4 719 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 STK32CQ86UX6 486 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 C9orf40Q8IXQ3 194 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 DND1Q8IYX4 353 aaKnown RBP8.39□□□□□ -1.07
NR1I3-230ENST00000511944 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 SLC34A3Q8N130 599 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 ARMC10Q8N2F6 343 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 PARP8Q8N3A8 854 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 GALNT15Q8N3T1 639 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 MARVELD2Q8N4S9 558 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 BCORP1Q8N888 145 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 APCDD1LQ8NCL9 501 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 SIMC1Q8NDZ2 872 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 M1APQ8TC57 530 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 TFAP2CQ92754 450 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 DIO2Q92813 273 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 MR1Q95460 341 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 IP6K3Q96PC2 410 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 SLC29A1Q99808 456 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 WDR77Q9BQA1 342 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-230ENST00000511944 FUZQ9BT04 418 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 NUDT9Q9BW91 350 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 UBQLN4Q9NRR5 601 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 MKLN1Q9UL63 735 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 PCDHGA6Q9Y5G7 932 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 LAMA1P25391 3075 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 DNAH14Q0VDD8 3507 aa8.39□□□□□ -1.07
NR1I3-230ENST00000511944 NUP214P35658 2090 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-230ENST00000511944 RALGAPA1Q6GYQ0 2036 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 OR6C70A6NIJ9 312 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 H3BNH8 94 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 HRKO00198 91 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 FAAHO00519 579 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 AP3D1O14617 1153 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 HS6ST1O60243 411 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 CNOT3O75175 753 aaKnown RBP8.38□□□□□ -1.07
NR1I3-230ENST00000511944 EPPINO95925 133 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 ADAP00813 363 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 IGHA1P01876 353 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 H1F0P07305 194 aaKnown RBP8.38□□□□□ -1.07
NR1I3-230ENST00000511944 GSTP1P09211 210 aaKnown RBP8.38□□□□□ -1.07
NR1I3-230ENST00000511944 FTH1P19P0C7X4 201 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 ITGAMP11215 1152 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 ICAM2P13598 275 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 ZNF28P17035 718 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 RGS8P57771 180 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-230ENST00000511944 SLC26A5P58743 744 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 RNF4P78317 190 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 SPIBQ01892 262 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 ST3GAL3Q11203 375 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 MERTKQ12866 999 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 SSPNQ14714 243 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 MICAQ29983 383 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 PLAG1Q6DJT9 500 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 ZNF613Q6PF04 617 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 DHRS13Q6UX07 377 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 CD300LDQ6UXZ3 194 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 LANCL3Q6ZV70 420 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 ZNF550Q7Z398 422 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 MISPQ8IVT2 679 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 TAGAPQ8N103 731 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 DHRSXQ8N5I4 330 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 LSMEM1Q8N8F7 131 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 FAM71CQ8NEG0 241 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 GIPC3Q8TF64 312 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 PIK3R3Q92569 461 aa8.38□□□□□ -1.07
NR1I3-230ENST00000511944 FAM46AQ96IP4 442 aaKnown RBP8.38□□□□□ -1.07
NR1I3-230ENST00000511944 ZNF559Q9BR84 538 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms