RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	TCEAL3	Q969E4	200 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	CLDN23	Q96B33	292 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	NTNG2	Q96CW9	530 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	MRPL53	Q96EL3	112 aa	Known RBP	4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	CNOT6L	Q96LI5	555 aa	Known RBP	4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	TSPYL1	Q9H0U9	437 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895		Q9HAA7	133 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZNF446	Q9NWS9	450 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	CWC25	Q9NXE8	425 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	DIMT1	Q9UNQ2	313 aa	Known RBP	4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	MTF2	Q9Y483	593 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	GON4L	Q3T8J9	2241 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	FLNA	P21333	2647 aa	Known RBP	4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895		A0A1W2PQ72	361 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	TSPAN2	O60636	221 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	FMO6P	O60774	539 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	TKTL1	P51854	596 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	MFAP2	P55001	183 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	SLC12A3	P55017	1021 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	POU5F1	Q01860	360 aa	Known RBP	4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	SRSF5	Q13243	272 aa	Known RBP	4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	OLFML2A	Q68BL7	652 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	APOOL	Q6UXV4	268 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	MED8	Q96G25	268 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	PPP1R16A	Q96I34	528 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	RANBP9	Q96S59	729 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	TMEM9B	Q9NQ34	198 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	ACOXL	Q9NUZ1	547 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	HOXC10	Q9NYD6	342 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	B4GALT7	Q9UBV7	327 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	F5	P12259	2224 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	CSPG4	Q6UVK1	2322 aa		4.22	□□□□□ -1.73
LINC01088-208	ENST00000511895	ADAMTS9	Q9P2N4	1935 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	COL6A5	A8TX70	2615 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	APC	P25054	2843 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	C5orf51	A6NDU8	294 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	TRABD2B	A6NFA1	517 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	FCER2	P06734	321 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	ACADSB	P45954	432 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	KIAA1024L	P59773	190 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	KRT83	P78385	493 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	BTG3	Q14201	252 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	MORF4L2	Q15014	288 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	PPP1R3A	Q16821	1122 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	ACER2	Q5QJU3	275 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	FHL5	Q5TD97	284 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	FAM219B	Q5XKK7	198 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	PSMA8	Q8TAA3	256 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	RDH11	Q8TC12	318 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	RNASE8	Q8TDE3	154 aa	Known RBP	4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	BCL2L2	Q92843	193 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	PTP4A1	Q93096	173 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	C5orf30	Q96GV9	206 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	MTG1	Q9BT17	334 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	MRPL9	Q9BYD2	267 aa	Known RBP	4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	ABCG4	Q9H172	646 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	DCTPP1	Q9H773	170 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	ADGRL4	Q9HBW9	690 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	SLC9A8	Q9Y2E8	581 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895		Q9Y3F1	56 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	PTPRB	P23467	1997 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	MED13	Q9UHV7	2174 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	RTTN	Q86VV8	2226 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	MYH2	Q9UKX2	1941 aa		4.21	□□□□□ -1.74
LINC01088-208	ENST00000511895	SLC28A1	O00337	649 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	HAT1	O14929	419 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	REC8	O95072	547 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	NUDT14	O95848	222 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	GOT2	P00505	430 aa	Known RBP	4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	UGT1A6	P19224	532 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	UCP1	P25874	307 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	PRKAR2B	P31323	418 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	ARHGDIA	P52565	204 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	RPS4X	P62701	263 aa	Known RBP	4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	KLF5	Q13887	457 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	B3GLCT	Q6Y288	498 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	ASRGL1	Q7L266	308 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	ARMCX2	Q7L311	632 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	LUZP1	Q86V48	1076 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	FAM133A	Q8N9E0	248 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	FAM213A	Q9BRX8	229 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	TTYH2	Q9BSA4	534 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	ST6GALNAC5	Q9BVH7	336 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	SLITRK2	Q9H156	845 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	VPS54	Q9P1Q0	977 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	ERVK-18	Q9QC07	812 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	MLX	Q9UH92	298 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	CIDEB	Q9UHD4	219 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	MYH7B	A7E2Y1	1941 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	SIPA1L1	O43166	1804 aa		4.2	□□□□□ -1.74
LINC01088-208	ENST00000511895	NBEAL2	Q6ZNJ1	2754 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	EEF2K	O00418	725 aa	Known RBP	4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	SAP18	O00422	153 aa	Known RBP	4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	CDX4	O14627	284 aa	Predicted RBP	4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	SH2D1B	O14796	132 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	COPB2	P35606	906 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	FNTA	P49354	379 aa		4.19	□□□□□ -1.74
LINC01088-208	ENST00000511895	UCP2	P55851	309 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms