RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	PRKAR1B	P31321	381 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	ALDH3A2	P51648	485 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	RAD23A	P54725	363 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	EEF1A1	P68104	462 aa	Known RBP	10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	CDC20	Q12834	499 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	DAG1	Q14118	895 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	RFX4	Q33E94	735 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	SHQ1	Q6PI26	577 aa	Known RBP	10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	DHRS4L2	Q6PKH6	230 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	ZNF836	Q6ZNA1	936 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	NUP54	Q7Z3B4	507 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	COMTD1	Q86VU5	262 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	SIRT6	Q8N6T7	355 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	CLEC1A	Q8NC01	280 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	PIK3C3	Q8NEB9	887 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	RDH12	Q96NR8	316 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	EPYC	Q99645	322 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	PIP5K1A	Q99755	562 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	LHPP	Q9H008	270 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	UBQLN4	Q9NRR5	601 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	SMPD3	Q9NY59	655 aa	Predicted RBP	10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	ABCG2	Q9UNQ0	655 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	ENPP4	Q9Y6X5	453 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	ZFHX4	Q86UP3	3567 aa		10.83	□□□□□ -0.68
APBB3-217	ENST00000511459	CELSR3	Q9NYQ7	3312 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	PRAMEF25	A6NGN4	478 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	CLDN24	A6NM45	220 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	PDLIM1	O00151	329 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	SOCS2	O14508	198 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	AP3D1	O14617	1153 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	HS6ST1	O60243	411 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ICOSLG	O75144	302 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	OR6B1	O95007	311 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	LGI1	O95970	557 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	NGFR	P08138	427 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	NID1	P14543	1247 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	TNFRSF1B	P20333	461 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ITGA3	P26006	1051 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	RRM2	P31350	389 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	EIF2S3	P41091	472 aa	Known RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	SOX3	P41225	446 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	OR1E2	P47887	323 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ST13	P50502	369 aa	Known RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	RNF144A	P50876	292 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	RRAD	P55042	308 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	SOX8	P57073	446 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	FBXW4	P57775	412 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	EFR3A	Q14156	821 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	MEP1A	Q16819	746 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ZNF791	Q3KP31	576 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	KLHL26	Q53HC5	615 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ACER2	Q5QJU3	275 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	PDZK1	Q5T2W1	519 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	APOOL	Q6UXV4	268 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	DEF8	Q6ZN54	512 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	CLIP4	Q8N3C7	705 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ZNF555	Q8NEP9	628 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	PHF10	Q8WUB8	498 aa	Known RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	APOBEC4	Q8WW27	367 aa	Known RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	OIT3	Q8WWZ8	545 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	HGD	Q93099	445 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	C7orf34	Q96L11	122 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ZNF597	Q96LX8	424 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	WFDC6	Q9BQY6	131 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ING2	Q9H160	280 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	RYDEN	Q9NUL5	291 aa	Known RBP	10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	NDUFAF4	Q9P032	175 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	ENOPH1	Q9UHY7	261 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	POLH	Q9Y253	713 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	TESMIN	Q9Y4I5	508 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459		U3KQV3	271 aa		10.82	□□□□□ -0.68
APBB3-217	ENST00000511459	CEP295	Q9C0D2	2601 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	CDHR4	A6H8M9	788 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	SERINC4	A6NH21	518 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	SCD	O00767	359 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	FADS1	O60427	444 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	DIRAS1	O95057	198 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	GADD45G	O95257	159 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	OXSR1	O95747	527 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	TMED10	P49755	219 aa	Known RBP	10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	SSR4	P51571	173 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	CDH12	P55289	794 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	TPD52	P55327	224 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	RGS8	P57771	180 aa	Predicted RBP	10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	FGFBP1	Q14512	234 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	NTRK2	Q16620	822 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	DEFB109B	Q30KR1	87 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	IQCC	Q4KMZ1	466 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	MRPL2	Q5T653	305 aa	Known RBP	10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	RNF220	Q5VTB9	566 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	OPN5	Q6U736	354 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	TSEN54	Q7Z6J9	526 aa	Known RBP	10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	EPHX4	Q8IUS5	362 aa		10.81	□□□□□ -0.68
APBB3-217	ENST00000511459	SPACA3	Q8IXA5	215 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms