RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 COX15Q7KZN9 410 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 ARPINQ7Z6K5 226 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 SLC26A11Q86WA9 606 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 NR2C2APQ86WQ0 139 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 CROCCP3Q8IVE0 287 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 ARHGAP12Q8IWW6 846 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 ICA1LQ8NDH6 482 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 FBXO36Q8NEA4 188 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 TAS1R2Q8TE23 839 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 FAM216AQ8WUB2 273 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 HAUS1Q96CS2 278 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 LRRC39Q96DD0 335 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 DTD2Q96FN9 168 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 COX14Q96I36 57 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 DACH2Q96NX9 599 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 FAM111AQ96PZ2 611 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 TNFRSF13CQ96RJ3 184 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 THTPAQ9BU02 230 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 CCDC106Q9BWC9 280 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 HEMGNQ9BXL5 484 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 CHODLQ9H9P2 273 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 MRM3Q9HC36 420 aaKnown RBP4.82□□□□□ -1.64
GYPB-212ENST00000511198 PLSCR4Q9NRQ2 329 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 HRASLS2Q9NWW9 162 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 COX16Q9P0S2 106 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 SLC17A7Q9P2U7 560 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 BCAP29Q9UHQ4 241 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 RAB26Q9ULW5 256 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 DOCK7Q96N67 2140 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 KIAA1549Q9HCM3 1950 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 DNAH3Q8TD57 4116 aa4.82□□□□□ -1.64
GYPB-212ENST00000511198 ZNF407Q9C0G0 2248 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 IGHV4-28A0A0C4DH34 117 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 CXorf51AA0A1B0GTR3 108 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 A0A1B0GVG6 124 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 OR5K3A6NET4 321 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 SDR42E2A6NKP2 422 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 DEFB108AA8MXU0 73 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 NPIPA2E9PIF3 369 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 NPIPA3F8WFD2 350 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 HS6ST1O60243 411 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 PFDN1O60925 122 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 BAG2O95816 211 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 PRB2P02812 416 aaPredicted RBP4.81□□□□□ -1.64
GYPB-212ENST00000511198 SNRPAP09012 282 aaKnown RBP4.81□□□□□ -1.64
GYPB-212ENST00000511198 IGHV4-31P0DP07 118 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 SLC2A3P11169 496 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 COX6A1P12074 109 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 IDO1P14902 403 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 VCLP18206 1134 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 SSTR1P30872 391 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 CPOXP36551 454 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 RFC3P40938 356 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 GPR1P46091 355 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 CLCNKAP51800 687 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 EFNA3P52797 238 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 AP3M2P53677 418 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 ERVFC1-1P60608 527 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 MSLNQ13421 630 aaPredicted RBP4.81□□□□□ -1.64
GYPB-212ENST00000511198 TMED1Q13445 227 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 DCTN2Q13561 401 aaKnown RBP4.81□□□□□ -1.64
GYPB-212ENST00000511198 FASTKQ14296 549 aaKnown RBP4.81□□□□□ -1.64
GYPB-212ENST00000511198 EFTUD2Q15029 972 aaKnown RBP eCLIP4.81□□□□□ -1.64
GYPB-212ENST00000511198 OR1C1Q15619 314 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 MMEL1Q495T6 779 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 SFT2D3Q587I9 215 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 ZNF628Q5EBL2 1059 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 OGFRL1Q5TC84 451 aaPredicted RBP4.81□□□□□ -1.64
GYPB-212ENST00000511198 CYB5R2Q6BCY4 276 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 KRTAP5-11Q6L8G4 156 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 DNAJC24Q6P3W2 148 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 ABRAXAS1Q6UWZ7 409 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 MFSD7Q6UXD7 560 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 C4orf22Q6V702 233 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 NDUFAF7Q7L592 441 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 ZNF554Q86TJ5 538 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 BEST3Q8N1M1 668 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 NAXEQ8NCW5 288 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 OR4N2Q8NGD1 307 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 ACMSDQ8TDX5 336 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 TMED6Q8WW62 240 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 TMEM18Q96B42 140 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 CMTM5Q96DZ9 223 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 MPP4Q96JB8 637 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 BIRC8Q96P09 236 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 OLFM1Q99784 485 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 C11orf70Q9BRQ4 267 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 HAUS8Q9BT25 410 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 ABCG8Q9H221 673 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 WDR54Q9H977 334 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 FN3KRPQ9HA64 309 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 SYTL2Q9HCH5 934 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 CISHQ9NSE2 258 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 DDIT4Q9NX09 232 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 MED29Q9NX70 200 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 HACD3Q9P035 362 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 NLKQ9UBE8 527 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 LHX3Q9UBR4 397 aa4.81□□□□□ -1.64
GYPB-212ENST00000511198 B4GALT7Q9UBV7 327 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms