RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 TRABD2AQ86V40 505 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 MISPQ8IVT2 679 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 CNPY4Q8N129 248 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 GABRG1Q8N1C3 465 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 STEAP2Q8NFT2 490 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 OR6Y1Q8NGX8 325 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 CEP70Q8NHQ1 597 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 RNF128Q8TEB7 428 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 AKAP1Q92667 903 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMAD5-207ENST00000511116 KLHDC3Q9BQ90 382 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 RRAGDQ9NQL2 400 aaPredicted RBP20.37■□□□□ 0.85
SMAD5-207ENST00000511116 GOLGA8RI6L899 631 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 KCNK2O95069 426 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 LINGO3P0C6S8 592 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 DANCRP0C864 163 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 PYGBP11216 843 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 RPS4XP62701 263 aaKnown RBP20.36■□□□□ 0.85
SMAD5-207ENST00000511116 HSPB3Q12988 150 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 ZNF385BQ569K4 471 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 HBMQ6B0K9 141 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 HEPHL1Q6MZM0 1159 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 PPP4R4Q6NUP7 873 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 DNAJC14Q6Y2X3 702 aaPredicted RBP20.36■□□□□ 0.85
SMAD5-207ENST00000511116 TRMT10CQ7L0Y3 403 aaKnown RBP20.36■□□□□ 0.85
SMAD5-207ENST00000511116 CCNYL1Q8N7R7 359 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 SLC16A11Q8NCK7 471 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 LRRN4CLQ8ND94 238 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 RAB3IL1Q8TBN0 382 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 MS4A4EQ96PG1 132 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 HDHD5Q9BXW7 423 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 DCDC2Q9UHG0 476 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 CR1P17927 2039 aa20.36■□□□□ 0.85
SMAD5-207ENST00000511116 UQCRHLA0A096LP55 91 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 RIPK2O43353 540 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 ELK4P28324 431 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 ZNF41P51814 821 aaPredicted RBP20.35■□□□□ 0.85
SMAD5-207ENST00000511116 DNAJB13P59910 316 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 PDE7AQ13946 482 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 ZNF239Q16600 458 aaKnown RBP20.35■□□□□ 0.85
SMAD5-207ENST00000511116 GTF2IRD2BQ6EKJ0 949 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 SEZ6L2Q6UXD5 910 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 TFAP2EQ6VUC0 442 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 RNF165Q6ZSG1 346 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 GTF2IRD2Q86UP8 949 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 NUP43Q8NFH3 380 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 OSTF1Q92882 214 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 CIDECQ96AQ7 238 aaPredicted RBP20.35■□□□□ 0.85
SMAD5-207ENST00000511116 S100PBPQ96BU1 408 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 KLHL15Q96M94 604 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 CCT7Q99832 543 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 GP6Q9HCN6 339 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 UBQLN4Q9NRR5 601 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 ACSS1Q9NUB1 689 aaPredicted RBP20.35■□□□□ 0.85
SMAD5-207ENST00000511116 LAMP3Q9UQV4 416 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 RNF115Q9Y4L5 304 aa20.35■□□□□ 0.85
SMAD5-207ENST00000511116 URI1O94763 535 aaPredicted RBP20.34■□□□□ 0.85
SMAD5-207ENST00000511116 OPN1LWP04000 364 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 PABPC4LP0CB38 370 aaKnown RBP20.34■□□□□ 0.85
SMAD5-207ENST00000511116 UROSP10746 265 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 ME2P23368 584 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 CD226Q15762 336 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 DUSP5Q16690 384 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 CLEC12BQ2HXU8 276 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 NCMAPQ5T1S8 102 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 PDSS1Q5T2R2 415 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 ZCCHC12Q6PEW1 402 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 DNM1P46Q6ZS02 220 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 GATSQ8NAP1 163 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 ZFP28Q8NHY6 868 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 ZBED6CLQ96FA7 236 aaPredicted RBP20.34■□□□□ 0.85
SMAD5-207ENST00000511116 REEP4Q9H6H4 257 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 TMEM185BQ9H7F4 350 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 FBXO34Q9NWN3 711 aa20.34■□□□□ 0.85
SMAD5-207ENST00000511116 SEC22BO75396 215 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 HSPA4LO95757 839 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 PROCP04070 461 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 SOD3P08294 240 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 MYL2P10916 166 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 SHC1P29353 583 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 GPC1P35052 558 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 EIF1P41567 113 aaKnown RBP20.33■□□□□ 0.85
SMAD5-207ENST00000511116 CARD18P57730 90 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 RNPS1Q15287 305 aaKnown RBP20.33■□□□□ 0.85
SMAD5-207ENST00000511116 ANKRD26P1Q6NSI1 321 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 FIGNL1Q6PIW4 674 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 LILRA2Q8N149 483 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 B4GALNT2Q8NHY0 566 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 ABHD3Q8WU67 409 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 CPNE4Q96A23 557 aaPredicted RBP20.33■□□□□ 0.85
SMAD5-207ENST00000511116 IQCGQ9H095 443 aaKnown RBP20.33■□□□□ 0.85
SMAD5-207ENST00000511116 C12orf49Q9H741 205 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 C1orf109Q9NX04 203 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 KLHL13Q9P2N7 655 aa20.33■□□□□ 0.85
SMAD5-207ENST00000511116 PSMC3IPQ9P2W1 217 aaPredicted RBP20.33■□□□□ 0.85
SMAD5-207ENST00000511116 EFNA2O43921 213 aa20.32■□□□□ 0.84
SMAD5-207ENST00000511116 GLRA3O75311 464 aa20.32■□□□□ 0.84
SMAD5-207ENST00000511116 SDC1P18827 310 aa20.32■□□□□ 0.84
SMAD5-207ENST00000511116 ADH6P28332 368 aa20.32■□□□□ 0.84
SMAD5-207ENST00000511116 SERPINB4P48594 390 aa20.32■□□□□ 0.84
SMAD5-207ENST00000511116 PRIM2P49643 509 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms