RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 CALHM2Q9HA72 323 aa8.49□□□□□ -1.05
DDX41-209ENST00000508279 MRPS18CQ9Y3D5 142 aaKnown RBP8.49□□□□□ -1.05
DDX41-209ENST00000508279 ADGRG4Q8IZF6 3080 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 UQCRHLA0A096LP55 91 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 CD8B2A6NJW9 211 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 H3BNH8 94 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 ANKRD28O15084 1053 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 GSNP06396 782 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 OR12D1P0DN82 309 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 ZNF708P17019 499 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 UQCRC2P22695 453 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 CTSSP25774 331 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 CEACAM8P31997 349 aaPredicted RBP8.48□□□□□ -1.05
DDX41-209ENST00000508279 CCR4P51679 360 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 SUCLG1P53597 346 aaKnown RBP8.48□□□□□ -1.05
DDX41-209ENST00000508279 CLDN20P56880 219 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 TLE4Q04727 773 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 TFF3Q07654 80 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 SGCBQ16585 318 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 DPY19L1Q2PZI1 675 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 EXOSC6Q5RKV6 272 aaKnown RBP8.48□□□□□ -1.05
DDX41-209ENST00000508279 ATAD3BQ5T9A4 648 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 DNAJC14Q6Y2X3 702 aaPredicted RBP8.48□□□□□ -1.05
DDX41-209ENST00000508279 ZNF621Q6ZSS3 439 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 MAVSQ7Z434 540 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 HMGN2P46Q86SG4 172 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 ZNF295-AS1Q8N0V1 137 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 ATP6V1C2Q8NEY4 427 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 PNPT1Q8TCS8 783 aaKnown RBP8.48□□□□□ -1.05
DDX41-209ENST00000508279 RAB8BQ92930 207 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 LRRC46Q96FV0 321 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 OR52B2Q96RD2 323 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 PANX1Q96RD7 426 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 NPAS1Q99742 590 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 TM9SF2Q99805 663 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 SPOCK3Q9BQ16 436 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 KLHDC3Q9BQ90 382 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 INPP5KQ9BT40 448 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 PINK1Q9BXM7 581 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 TRIM8Q9BZR9 551 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 ENKD1Q9H0I2 346 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 SERHL2Q9H4I8 314 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 TMEM185BQ9H7F4 350 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 SLCO1B3Q9NPD5 702 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 EXD2Q9NVH0 621 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 MKLN1Q9UL63 735 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 CARD8Q9Y2G2 431 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 GPR45Q9Y5Y3 372 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 USH1CQ9Y6N9 552 aa8.48□□□□□ -1.05
DDX41-209ENST00000508279 IGLV3-32A0A0A0MS00 114 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 MBD3L4A6NDZ8 208 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 MBD3L3A6NE82 208 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 CCDC154A6NI56 674 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 MBD3L5A6NJ08 208 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 SLC22A20A6NK97 555 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 DUXAA6NLW8 204 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 HMGB1P1B2RPK0 211 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 EIF1AYO14602 144 aaKnown RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 KLF11O14901 512 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 UBDO15205 165 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 OIP5O43482 229 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 SCN2BO60939 215 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 TNFRSF21O75509 655 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 SLC22A3O75751 556 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 ANP32DO95626 131 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 TGM6O95932 706 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 C1QCP02747 245 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 PGRP06401 933 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 NGFRP08138 427 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 IDO1P14902 403 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 SSTR2P30874 369 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 LCN1P31025 176 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 OPRM1P35372 400 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 CDKN2CP42773 168 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 EIF1AXP47813 144 aaKnown RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 CPA2P48052 419 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 KHKP50053 298 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 ASCL1P50553 236 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 ATP12AP54707 1039 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 EEFSECP57772 596 aaKnown RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 PPP2R2AP63151 447 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 SIRPAP78324 504 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 HPCAP84074 193 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 ZNF117Q03924 483 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 FOXF2Q12947 444 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 GPAT3Q53EU6 434 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.47□□□□□ -1.05
DDX41-209ENST00000508279 PDZK1Q5T2W1 519 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 LUZP2Q86TE4 346 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 TMEM200AQ86VY9 491 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 RNF130Q86XS8 419 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 MISPQ8IVT2 679 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 LRRC34Q8IZ02 419 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 TRIML2Q8N7C3 387 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 CNEP1R1Q8N9A8 125 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 GOT1L1Q8NHS2 421 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 MBD3L2Q8NHZ7 208 aaPredicted RBP8.47□□□□□ -1.05
DDX41-209ENST00000508279 ACTRT2Q8TDY3 377 aa8.47□□□□□ -1.05
DDX41-209ENST00000508279 WNT2BQ93097 391 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms