RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 WDR1O75083 606 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 GMNNO75496 209 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PGM3O95394 542 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 H6PDO95479 791 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 ANGPTL1O95841 491 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 UBL4AP11441 157 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 HSD17B1P14061 328 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 IL7RP16871 459 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PGCP20142 388 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PTGDSP41222 190 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 TDGF1P3P51864 188 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PCBP3P57721 371 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PPIAP62937 165 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 KCNJ10P78508 379 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 FOXK1P85037 733 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 CBFBQ13951 182 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 UBAP2LQ14157 1087 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 FXNQ16595 210 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 CYP51A1Q16850 503 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 VMACQ2NL98 169 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 GRAMD1BQ3KR37 738 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 GPAT3Q53EU6 434 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 MTX3Q5HYI7 312 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SAMD4BQ5PRF9 694 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SWT1Q5T5J6 900 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 FNDC7Q5VTL7 733 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 TYW3Q6IPR3 259 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 TNFAIP8L2Q6P589 184 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF605Q86T29 641 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 RETREG3Q86VR2 466 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 MSRB3Q8IXL7 192 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SIMC1Q8NDZ2 872 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 CATSPER1Q8NEC5 780 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 OR4K17Q8NGC6 315 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 OR5W2Q8NH69 310 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 B4GALNT2Q8NHY0 566 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 NEIL3Q8TAT5 605 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PHF10Q8WUB8 498 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SLC25A43Q8WUT9 341 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 LZICQ8WZA0 190 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PIK3R3Q92569 461 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 EFHD2Q96C19 240 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 NSL1Q96IY1 281 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 MRGPRX4Q96LA9 322 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 ZFP3Q96NJ6 502 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 UCN2Q96RP3 112 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 NODALQ96S42 347 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PINK1Q9BXM7 581 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SERHL2Q9H4I8 314 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 BAG5Q9UL15 447 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 PRPF19Q9UMS4 504 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 ZNF835Q9Y2P0 537 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SPIN1Q9Y657 262 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 AP4B1Q9Y6B7 739 aa7.72□□□□□ -1.17
PDGFC-205ENST00000506880 SPTBN1Q01082 2364 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 FASNP49327 2511 aaKnown RBP7.72□□□□□ -1.17
PDGFC-205ENST00000506880 ARHGAP21Q5T5U3 1957 aa7.71□□□□□ -1.17
PDGFC-205ENST00000506880 PCNX3Q9H6A9 2034 aa7.71□□□□□ -1.17
PDGFC-205ENST00000506880 GXYLT2A0PJZ3 443 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 LRRC3CA6NJW4 275 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 FIGNL2A6NMB9 653 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 GTPBP1O00178 669 aaKnown RBP7.71□□□□□ -1.18
PDGFC-205ENST00000506880 MASP2O00187 686 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 SLC28A2O43868 658 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 UGT2B17O75795 530 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 CSTAP01040 98 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 STSP08842 583 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 ESRRAP11474 423 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-205ENST00000506880 PEPDP12955 493 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 CPN1P15169 458 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 AGAP20933 346 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 HTR1EP28566 365 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF41P51814 821 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-205ENST00000506880 GYS2P54840 703 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 PER3P56645 1201 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 BNIP2Q12982 314 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 SCARB2Q14108 478 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 TMEM44Q2T9K0 475 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 DNAL1Q4LDG9 190 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 TRILQ7L0X0 811 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 GTPBP8Q8N3Z3 284 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-205ENST00000506880 TMEM251Q8N6I4 163 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 WDSUB1Q8N9V3 476 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 OR2T12Q8NG77 320 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 OR2M3Q8NG83 312 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 OR4N2Q8NGD1 307 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 OR5D16Q8NGK9 328 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 OR4C3Q8NH37 302 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 WDR60Q8WVS4 1066 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 RCN3Q96D15 328 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 C1GALT1C1Q96EU7 318 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 TMEM19Q96HH6 336 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 BBC3Q96PG8 261 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-205ENST00000506880 TAAR6Q96RI8 345 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 ANKRA2Q9H9E1 313 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 LIN28AQ9H9Z2 209 aaKnown RBP7.71□□□□□ -1.18
PDGFC-205ENST00000506880 GP6Q9HCN6 339 aa7.71□□□□□ -1.18
PDGFC-205ENST00000506880 KLHL1Q9NR64 748 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms