RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HOXD1Q9GZZ0 328 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 RABEP2Q9H5N1 569 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 PCNX1Q96RV3 2341 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 ICE1Q9Y2F5 2266 aa16.54■□□□□ 0.24
PDLIM7-216ENST00000506537 TRBV5-3A0A0A0MS03 114 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 A1L4Q6 167 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 FIGNL2A6NMB9 653 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 KDM4EB2RXH2 506 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 UGT2B17O75795 530 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 CLDN1O95832 211 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 CHRM4P08173 479 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 GUSBP08236 651 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 ETFAP13804 333 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 HK1P19367 917 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 ACVR2AP27037 513 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 TXNL4AP83876 142 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 ZNF117Q03924 483 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 ZNF141Q15928 474 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 MAPK14Q16539 360 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 NDUFAF6Q330K2 333 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 AP1ARQ63HQ0 302 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 MTFR2Q6P444 385 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 MISPQ8IVT2 679 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 ZNF614Q8N883 585 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 ZNF527Q8NB42 609 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 OR5M1Q8NGP8 315 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 PHOSPHO1Q8TCT1 267 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 C10orf82Q8WW14 230 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 WDYHV1Q96HA8 205 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 SFXN2Q96NB2 322 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 NPAS1Q99742 590 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 SAP130Q9H0E3 1048 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 RUBCNLQ9H714 662 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 KLHL14Q9P2G3 628 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 WDR45Q9Y484 360 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 DTNAQ9Y4J8 743 aa16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 PHF3Q92576 2039 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-216ENST00000506537 KIAA1549Q9HCM3 1950 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 A0A1W2PP18 115 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 SHISA8B8ZZ34 492 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 WDR1O75083 606 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 H6PDO95479 791 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 ACTL6AO96019 429 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 STARP49675 285 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 LHX2P50458 406 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 GYS2P54840 703 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 CHRNEQ04844 493 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 CDSNQ15517 529 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 TMEM44Q2T9K0 475 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 GPAT3Q53EU6 434 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 CBLN3Q6UW01 205 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 MTERF4Q7Z6M4 381 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 HMGN2P46Q86SG4 172 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 RETREG3Q86VR2 466 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 ZG16BQ96DA0 208 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 DTNBP1Q96EV8 351 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 TRNT1Q96Q11 434 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 SLC38A1Q9H2H9 487 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 PTGES2Q9H7Z7 377 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 POLE3Q9NRF9 147 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 ALKBH4Q9NXW9 302 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 VAPAQ9P0L0 249 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 CAMK2AQ9UQM7 478 aa16.52■□□□□ 0.24
PDLIM7-216ENST00000506537 NBPF19A0A087WUL8 3843 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 SERINC4A6NH21 518 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 CLIC1O00299 241 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 HCRTR2O43614 444 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 CHMP24386 653 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 MSX1P28360 303 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 CRATP43155 626 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 MAGEA8P43361 318 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 ANXA11P50995 505 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 NUP107P57740 925 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 PLAURQ03405 335 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF630Q2M218 657 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 ACSF3Q4G176 576 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 C1orf185Q5T7R7 199 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 RAET1LQ5VY80 246 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 DLEU7Q6UYE1 221 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 RPTNQ6XPR3 784 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 MRGPRGQ86SM5 289 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 EID3Q8N140 333 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 ZNF619Q8N2I2 560 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 C10orf111Q8N326 155 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 B4GALNT2Q8NHY0 566 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 TTYH2Q9BSA4 534 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 QRSL1Q9H0R6 528 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 IKZF5Q9H5V7 419 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 SAR1AQ9NR31 198 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 ICAM5Q9UMF0 924 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 LIPT1Q9Y234 373 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 VDAC3Q9Y277 283 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 CARD8Q9Y2G2 431 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
PDLIM7-216ENST00000506537 OR2M5A3KFT3 312 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 BCAS1O75363 584 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 NUDT7P0C024 238 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 GLI4P10075 376 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 GABRA1P14867 456 aa16.5■□□□□ 0.23
PDLIM7-216ENST00000506537 GCKP35557 465 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms