RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SYNGR4O95473 234 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 OPN1LWP04000 364 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 ME2P23368 584 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 LCN1P31025 176 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 PLPPR5Q32ZL2 321 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 CPTPQ5TA50 214 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 Q71RC1 249 aaPredicted RBP22.13■■□□□ 1.13
HERC4-212ENST00000505760 MISPQ8IVT2 679 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 LRRC75A-AS1Q8N1F1 130 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 OTUB1Q96FW1 271 aaPredicted RBP22.13■■□□□ 1.13
HERC4-212ENST00000505760 RNF145Q96MT1 663 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 PLSCR4Q9NRQ2 329 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 MED17Q9NVC6 651 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 FBXO34Q9NWN3 711 aa22.13■■□□□ 1.13
HERC4-212ENST00000505760 C7orf72A4D263 438 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 TMEM233B4DJY2 109 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 BCKDHAP12694 445 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 HPCAL1P37235 193 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 PRIM2P49643 509 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 RAC1P63000 192 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 LTBQ06643 244 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 CCNJQ5T5M9 372 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 LRIG3Q6UXM1 1119 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 PIAS4Q8N2W9 510 aaPredicted RBP22.12■■□□□ 1.13
HERC4-212ENST00000505760 TWIST2Q8WVJ9 160 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 ADGRG7Q96K78 797 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 HS3ST6Q96QI5 342 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 NPAS1Q99742 590 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 TMEM185BQ9H7F4 350 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 EML4Q9HC35 981 aaKnown RBP22.12■■□□□ 1.13
HERC4-212ENST00000505760 ZCCHC3Q9NUD5 404 aaKnown RBP22.12■■□□□ 1.13
HERC4-212ENST00000505760 TRAF6Q9Y4K3 522 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 ROS1P08922 2347 aa22.12■■□□□ 1.13
HERC4-212ENST00000505760 TLDC2A0PJX2 215 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 TMEM114B3SHH9 223 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 TNFSF11O14788 317 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 ADAMDEC1O15204 470 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 CXCL13O43927 109 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 SS18L1O75177 396 aaPredicted RBP22.11■■□□□ 1.13
HERC4-212ENST00000505760 HSPA4LO95757 839 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 CHRNGP07510 517 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 POU6F2P78424 691 aaPredicted RBP22.11■■□□□ 1.13
HERC4-212ENST00000505760 PDSS1Q5T2R2 415 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 CLEC9AQ6UXN8 241 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 C20orf204Q6ZNR8 217 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 C22orf34Q6ZV56 151 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 ESPNLQ6ZVH7 1005 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 OR2V1Q8NHB1 315 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 B4GALNT2Q8NHY0 566 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 FAM120BQ96EK7 910 aaKnown RBP22.11■■□□□ 1.13
HERC4-212ENST00000505760 APOPT1Q96IL0 206 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 MARK4Q96L34 752 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 BTBD2Q9BX70 525 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 FANCFQ9NPI8 374 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 GLRX2Q9NS18 164 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 SNX8Q9Y5X2 465 aa22.11■■□□□ 1.13
HERC4-212ENST00000505760 PIP5K1BO14986 540 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 NPHS1O60500 1241 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 HMGN2P05204 90 aaKnown RBP22.1■■□□□ 1.13
HERC4-212ENST00000505760 FGF4P08620 206 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 PPP3CBP16298 524 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 PSMA4P25789 261 aaKnown RBP22.1■■□□□ 1.13
HERC4-212ENST00000505760 MAPK1P28482 360 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 ALDH3A1P30838 453 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 RPL3P39023 403 aaKnown RBP22.1■■□□□ 1.13
HERC4-212ENST00000505760 MLC1Q15049 377 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 CTU2Q2VPK5 515 aaKnown RBP22.1■■□□□ 1.13
HERC4-212ENST00000505760 ARL13AQ5H913 290 aaPredicted RBP22.1■■□□□ 1.13
HERC4-212ENST00000505760 HBMQ6B0K9 141 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 STK32CQ86UX6 486 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 DUSP22Q9NRW4 184 aa22.1■■□□□ 1.13
HERC4-212ENST00000505760 SIRT3Q9NTG7 399 aaPredicted RBP22.1■■□□□ 1.13
HERC4-212ENST00000505760 NUP214P35658 2090 aaPredicted RBP22.1■■□□□ 1.13
HERC4-212ENST00000505760 A0A1W2PQD3 144 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 SCAMP2O15127 329 aaKnown RBP22.09■■□□□ 1.13
HERC4-212ENST00000505760 IL11P20809 199 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 ATP6V1C1P21283 382 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 LASP1Q14847 261 aaKnown RBP22.09■■□□□ 1.13
HERC4-212ENST00000505760 UGT3A2Q3SY77 523 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 OR7A2PQ8NGA2 310 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 AGR3Q8TD06 166 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 CDS1Q92903 461 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 PPP3R2Q96LZ3 170 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 STACQ99469 402 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 MKS1Q9NXB0 559 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 ATP6V1HQ9UI12 483 aa22.09■■□□□ 1.13
HERC4-212ENST00000505760 RAI1Q7Z5J4 1906 aaPredicted RBP22.08■■□□□ 1.13
HERC4-212ENST00000505760 A0A0J9YW62 118 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 FAM171A2A8MVW0 826 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 PEX11AO75192 247 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 LOXP28300 417 aaPredicted RBP22.08■■□□□ 1.13
HERC4-212ENST00000505760 EIF1P41567 113 aaKnown RBP22.08■■□□□ 1.13
HERC4-212ENST00000505760 CD226Q15762 336 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 BEX5Q5H9J7 111 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 EXOSC6Q5RKV6 272 aaKnown RBP22.08■■□□□ 1.13
HERC4-212ENST00000505760 GTF2IRD2BQ6EKJ0 949 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 STAC2Q6ZMT1 411 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 BEND4Q6ZU67 534 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 GTF2IRD2Q86UP8 949 aa22.08■■□□□ 1.13
HERC4-212ENST00000505760 LILRA2Q8N149 483 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 361.1 ms