RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 TMEM27Q9HBJ8 222 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CCNB1IP1Q9NPC3 277 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 KRCC1Q9NPI7 259 aaPredicted RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 FTSJ1Q9UET6 329 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 TESQ9UGI8 421 aaKnown RBP7.45□□□□□ -1.22
COL4A5-208ENST00000505728 KCNE5Q9UJ90 142 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 OR10H1Q9Y4A9 318 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 CLCA3PQ9Y6N3 262 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 HEATR5AQ86XA9 2040 aa7.45□□□□□ -1.22
COL4A5-208ENST00000505728 LOC400499M0QZD8 3231 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 A0A087WUU8 490 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 FRG2CA6NGY1 282 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 OR6C76A6NM76 312 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 A8MUA0 341 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 PEX12O00623 359 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 POLR1CO15160 346 aaPredicted RBP7.44□□□□□ -1.22
COL4A5-208ENST00000505728 TO15178 435 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 FLRT2O43155 660 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 FRS3O43559 492 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 SCRG1O75711 98 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 IL33O95760 270 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 DDAH2O95865 285 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 IGKV1D-16P01601 117 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 IGKV3-11P04433 115 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 SPINK2P20155 84 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 MMP11P24347 488 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ACP1P24666 158 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ADH7P40394 386 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 STAT5AP42229 794 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 GSSP48637 474 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 TSPAN31Q12999 210 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 TUBA3CQ13748 450 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 FGFBP1Q14512 234 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 IL11RAQ14626 422 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 PTGES3Q15185 160 aaKnown RBP7.44□□□□□ -1.22
COL4A5-208ENST00000505728 OR1Q1Q15612 314 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 NSDHLQ15738 373 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 NKAIN1Q4KMZ8 207 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 PHF19Q5T6S3 580 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 FOXB2Q5VYV0 432 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 SLX4IPQ5VYV7 408 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF613Q6PF04 617 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF730Q6ZMV8 503 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 KCTD8Q6ZWB6 473 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 COX15Q7KZN9 410 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 OVCH1Q7RTY7 1134 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF550Q7Z398 422 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 PRICKLE2Q7Z3G6 844 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 GDF7Q7Z4P5 450 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 GPR141Q7Z602 305 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ZER1Q7Z7L7 766 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 B3GNT8Q7Z7M8 397 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ZAR1Q86SH2 424 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 CCDC71Q8IV32 467 aaPredicted RBP7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ZNF440Q8IYI8 595 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ENTHD1Q8IYW4 607 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 BCORP1Q8N888 145 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 AGBL5Q8NDL9 886 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 BPIFB6Q8NFQ5 453 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 OR4N2Q8NGD1 307 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 PIGXQ8TBF5 258 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 STT3BQ8TCJ2 826 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 SLC2A12Q8TD20 617 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 TRUB1Q8WWH5 349 aaKnown RBP7.44□□□□□ -1.22
COL4A5-208ENST00000505728 CLIP3Q96DZ5 547 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 LCORQ96JN0 433 aaPredicted RBP7.44□□□□□ -1.22
COL4A5-208ENST00000505728 HS6ST2Q96MM7 605 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 ITPAQ9BY32 194 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 TRIM2Q9C040 744 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 VN1R1Q9GZP7 353 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 TMEM9BQ9NQ34 198 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 SLC22A11Q9NSA0 550 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 MKL2Q9ULH7 1088 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 RNF6Q9Y252 685 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 PCDHGB1Q9Y5G3 927 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 SNX5Q9Y5X3 404 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 PTPRBP23467 1997 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 IGSF10Q6WRI0 2623 aa7.44□□□□□ -1.22
COL4A5-208ENST00000505728 KIF26BQ2KJY2 2108 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 NPIPA5A0A0B4J1W7 369 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 CENPVL1A0A0U1RR11 272 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 SH3D21A4FU49 640 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 VSTM2BA6NLU5 285 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 CLDN24A6NM45 220 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 EFCAB7A8K855 629 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 D6RAR5 112 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 PTGES3LE9PB15 166 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 NPIPA7E9PJI5 369 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 FAM20BO75063 409 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 WBP4O75554 376 aaKnown RBP7.43□□□□□ -1.22
COL4A5-208ENST00000505728 TP53P04637 393 aaPredicted RBP7.43□□□□□ -1.22
COL4A5-208ENST00000505728 HEXBP07686 556 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 ZGLP1P0C6A0 271 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 NPIPA8P0DM63 369 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 GABRB1P18505 474 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 ENDOUP21128 410 aaKnown RBP7.43□□□□□ -1.22
COL4A5-208ENST00000505728 POU1F1P28069 291 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 FMO3P31513 532 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 OMPP47874 163 aa7.43□□□□□ -1.22
COL4A5-208ENST00000505728 IDH2P48735 452 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms