RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 TRAF3Q13114 568 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 RNPS1Q15287 305 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 LTB4RQ15722 352 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 SGCBQ16585 318 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 TRMT12Q53H54 448 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 SGO1Q5FBB7 561 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 C6orf163Q5TEZ5 329 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 MROH9Q5TGP6 573 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 OR5M10Q6IEU7 315 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 MFSD12Q6NUT3 480 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 METTL2BQ6P1Q9 378 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 TFAP2EQ6VUC0 442 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 Q6ZT83 130 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 ESPNLQ6ZVH7 1005 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 CCDC25Q86WR0 208 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 WDR75Q8IWA0 830 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 MUC15Q8N387 334 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 KBTBD8Q8NFY9 601 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 OR4K17Q8NGC6 315 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 RHEBL1Q8TAI7 183 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 FBXO25Q8TCJ0 367 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 ZNF675Q8TD23 568 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 TMBIM1Q969X1 311 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 C1GALT1C1Q96EU7 318 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 RBM4Q9BWF3 364 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 BRINP2Q9C0B6 783 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 C12orf65Q9H3J6 166 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 NOL11Q9H8H0 719 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 FARSBQ9NSD9 589 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 CPSF2Q9P2I0 782 aaKnown RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 TMEFF2Q9UIK5 374 aaPredicted RBP5.31□□□□□ -1.56
GYPB-204ENST00000504951 PSME2Q9UL46 239 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 ACOT9Q9Y305 439 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 PLLPQ9Y342 182 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 ANGPTL3Q9Y5C1 460 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.31□□□□□ -1.566e-10■■■■■ 33.8
GYPB-204ENST00000504951 PMF1-BGLAPU3KQ54 211 aa5.31□□□□□ -1.56
GYPB-204ENST00000504951 CMYA5Q8N3K9 4069 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 A0A096LPK6 155 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 C1orf226A1L170 272 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 GOLGA6L10A6NI86 522 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 SYCE1LA8MT33 242 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 TMPRSS2O15393 492 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 KIAA0513O60268 411 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 RAMP1O60894 148 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 GUCY1B2O75343 617 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 REM1O75628 298 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 KLHL2O95198 593 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 CLDN9O95484 217 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 PLGP00747 810 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 PCSK2P16519 638 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 TSPAN8P19075 237 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 CSNK2A2P19784 350 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 COX5AP20674 150 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 IL32P24001 234 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 PSMA4P25789 261 aaKnown RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 NOS3P29474 1203 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 EVI2BP34910 448 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 KHKP50053 298 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 DVL1P1P54792 670 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 CDH11P55287 796 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 CORO7P57737 925 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 C21orf58P58505 322 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 C17orf67Q0P5P2 114 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 CALCOCO2Q13137 446 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 SWI5Q1ZZU3 235 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 CYP27C1Q4G0S4 372 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 ARL13AQ5H913 290 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 TECRLQ5HYJ1 363 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 TCHHL1Q5QJ38 904 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 CCNYL2Q5T2Q4 361 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 RAET1LQ5VY80 246 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 FRG2Q64ET8 278 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 SLC48A1Q6P1K1 146 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 TMEM108Q6UXF1 575 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 GALNT10Q86SR1 603 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 UBQLNLQ8IYU4 475 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 ALDH16A1Q8IZ83 802 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 FBXL14Q8N1E6 418 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 SLC43A2Q8N370 569 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 METTL4Q8N3J2 472 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 GTPBP8Q8N3Z3 284 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 TEX29Q8N6K0 151 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 PTGR2Q8N8N7 351 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 LINC01356Q8N9X3 169 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 SPATA4Q8NEY3 305 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 NUP43Q8NFH3 380 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 OR4F6Q8NGB9 312 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 OR10D3Q8NH80 312 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 ACTRT2Q8TDY3 377 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 RNF128Q8TEB7 428 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 GCDHQ92947 438 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 KISS1RQ969F8 398 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 TM4SF18Q96CE8 201 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 MUCL1Q96DR8 90 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 CNRIP1Q96F85 164 aaPredicted RBP5.3□□□□□ -1.56
GYPB-204ENST00000504951 VSTM2LQ96N03 204 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 ZNF681Q96N22 645 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 FRG2BQ96QU4 278 aa5.3□□□□□ -1.56
GYPB-204ENST00000504951 JMJD8Q96S16 334 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms