RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SLC38A5Q8WUX1 472 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 TM9SF4Q92544 642 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 TM4SF18Q96CE8 201 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 CEP19Q96LK0 163 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 ARHGDIGQ99819 225 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 SLC6A17Q9H1V8 727 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 MMP28Q9H239 520 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 ANKRD19PQ9H560 264 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 CXorf36Q9H7Y0 433 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 ERVMER34-1Q9H9K5 563 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 SLC28A3Q9HAS3 691 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 PELI2Q9HAT8 420 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 ZNF334Q9HCZ1 680 aaPredicted RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 ACSS1Q9NUB1 689 aaPredicted RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 IMPAD1Q9NX62 359 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 NDRG2Q9UN36 371 aaKnown RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 ENTPD4Q9Y227 616 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 YIPF1Q9Y548 306 aa3.65□□□□□ -1.82
CLTC-209ENST00000498711 TNRC18O15417 2968 aaPredicted RBP3.65□□□□□ -1.82
CLTC-209ENST00000498711 VCANP13611 3396 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 KMT2EQ8IZD2 1858 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 A0A087WWL8 130 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 A0A1W2PQL4 384 aaPredicted RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 A0A1W2PRB8 838 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 CCDC182A6NF36 153 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 FABP12A6NFH5 140 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 MGAT4DA6NG13 374 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 LEUTXA8MZ59 168 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 M0R129 80 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 HMGN4O00479 90 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 GRM6O15303 877 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 PRKYO43930 277 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 SLC19A2O60779 497 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 CDRT1O95170 752 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 OPN1SWP03999 348 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 H1F0P07305 194 aaKnown RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 LIMS3P0CW19 117 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 LIMS4P0CW20 117 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 CYP2A6P11509 494 aaPredicted RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 MAGP20916 626 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 GSTM3P21266 225 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 GKP32189 559 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 CD70P32970 193 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 BSGP35613 385 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 SOX3P41225 446 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 CRATP43155 626 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 GSK3AP49840 483 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 XKP51811 444 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 RAG2P55895 527 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 HOXC5Q00444 222 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 SMAD4Q13485 552 aaKnown RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 NAE1Q13564 534 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 HEPACAMQ14CZ8 416 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 CCSMST1Q4G0I0 132 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 ESCO2Q56NI9 601 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 EOGTQ5NDL2 527 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 PRAMEF14Q5SWL7 426 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 DCST1Q5T197 706 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 ARMC4Q5T2S8 1044 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 ADNP2Q6IQ32 1131 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 BRAT1Q6PJG6 821 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 PAQR6Q6TCH4 344 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 HSD11B1LQ7Z5J1 315 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 ZER1Q7Z7L7 766 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 SLC9B2Q86UD5 537 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 TMC8Q8IU68 726 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 CPOQ8IVL8 374 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 ADGRF3Q8IZF5 1079 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 C9orf62Q8N4C0 152 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 YIPF7Q8N8F6 280 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 RASGEF1AQ8N9B8 481 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 OR4K1Q8NGD4 311 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 OR52N1Q8NH53 320 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 VANGL1Q8TAA9 524 aaPredicted RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 UTP15Q8TED0 518 aaKnown RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 DNAJA4Q8WW22 397 aaPredicted RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 ACOT12Q8WYK0 555 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 AP3S1Q92572 193 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 NEIL2Q969S2 332 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 CIDECQ96AQ7 238 aaPredicted RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 CREB3L1Q96BA8 519 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 PPCDCQ96CD2 204 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 SORCS2Q96PQ0 1159 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 FYTTD1Q96QD9 318 aaKnown RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 SLC22A12Q96S37 553 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 MTERF1Q99551 399 aaKnown RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 TIMP4Q99727 224 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 DHRS9Q9BPW9 319 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 BBS2Q9BXC9 721 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 ATG10Q9H0Y0 220 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 SERHL2Q9H4I8 314 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 HEXA-AS1Q9H8Q6 139 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 FOLH1BQ9HBA9 442 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 HEYLQ9NQ87 328 aaPredicted RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 SNTG1Q9NSN8 517 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 GIMAP4Q9NUV9 329 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 MED17Q9NVC6 651 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 PAQR5Q9NXK6 330 aaPredicted RBP3.65□□□□□ -1.83
CLTC-209ENST00000498711 SH2B3Q9UQQ2 575 aa3.65□□□□□ -1.83
CLTC-209ENST00000498711 ITM2BQ9Y287 266 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms