RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 PLSCR4Q9NRQ2 329 aa6.74□□□□□ -1.33
VPS45-210ENST00000497638 IARS2Q9NSE4 1012 aaKnown RBP6.74□□□□□ -1.33
VPS45-210ENST00000497638 DNAJC11Q9NVH1 559 aa6.74□□□□□ -1.33
VPS45-210ENST00000497638 IKZF3Q9UKT9 509 aa6.74□□□□□ -1.33
VPS45-210ENST00000497638 ZNF490Q9ULM2 529 aaPredicted RBP6.74□□□□□ -1.33
VPS45-210ENST00000497638 CORO1CQ9ULV4 474 aaPredicted RBP6.74□□□□□ -1.33
VPS45-210ENST00000497638 CFL2Q9Y281 166 aa6.74□□□□□ -1.33
VPS45-210ENST00000497638 OARD1Q9Y530 152 aa6.74□□□□□ -1.33
VPS45-210ENST00000497638 EFCAB8A8MWE9 144 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 ACOX3O15254 700 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 ZIC3O60481 467 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 LY86O95711 162 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 CD8AP01732 235 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 NR2F6P10588 404 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 ZNF37AP17032 561 aaPredicted RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 ITGA2P17301 1181 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 IL11P20809 199 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 USF1P22415 310 aaPredicted RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 GABRB3P28472 473 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 SERPINB1P30740 379 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 APOBEC3AP31941 199 aaPredicted RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 CASP2P42575 452 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 COMPP49747 757 aaPredicted RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 NEK2P51955 445 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 ARFIP1P53367 373 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 PTTG1IPP53801 180 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 HNRNPH2P55795 449 aaKnown RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 CTBP2P56545 445 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 B3GALT5-AS1P59052 145 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 RPS3AP61247 264 aaKnown RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 HMGCS1Q01581 520 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 KIF5AQ12840 1032 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 DOC2AQ14183 400 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 PON3Q15166 354 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 HIST2H2ACQ16777 129 aaPredicted RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 AGAP6Q5VW22 663 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 KHDRBS2Q5VWX1 349 aaKnown RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 C18orf63Q68DL7 685 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 HIST2H2AA3Q6FI13 130 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 OR4C11Q6IEV9 310 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 FAM45BPQ6NSW5 357 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 FRA10AC1Q70Z53 315 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 CNTN4Q8IWV2 1026 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 ZCCHC7Q8N3Z6 543 aaKnown RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 PPM1NQ8N819 430 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 MCUQ8NE86 351 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 KBTBD8Q8NFY9 601 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 FAM45AQ8TCE6 357 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 ZNF473Q8WTR7 871 aaKnown RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 NEUROG1Q92886 237 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 UBE2E3Q969T4 207 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 TMCO6Q96DC7 493 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 OMA1Q96E52 524 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 CMTM7Q96FZ5 175 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 GMPPAQ96IJ6 420 aaPredicted RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 CENPKQ9BS16 269 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 TRIM2Q9C040 744 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 TOR3AQ9H497 397 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 CNOT10Q9H9A5 744 aaKnown RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 WDR41Q9HAD4 459 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 LYARQ9NX58 379 aaKnown RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 FBXL2Q9UKC9 423 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 B3GALT5Q9Y2C3 310 aa6.73□□□□□ -1.33
VPS45-210ENST00000497638 EPN1Q9Y6I3 576 aaPredicted RBP6.73□□□□□ -1.33
VPS45-210ENST00000497638 CENPVL1A0A0U1RR11 272 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 KIAA0513O60268 411 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 PRAMEF4O60810 478 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 SS18L1O75177 396 aaPredicted RBP6.72□□□□□ -1.33
VPS45-210ENST00000497638 UGT2B11O75310 529 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 PRKRAO75569 313 aaKnown RBP6.72□□□□□ -1.33
VPS45-210ENST00000497638 PLGP00747 810 aaPredicted RBP6.72□□□□□ -1.33
VPS45-210ENST00000497638 AHSGP02765 367 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 CD22P20273 847 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 TCEA1P23193 301 aaKnown RBP6.72□□□□□ -1.33
VPS45-210ENST00000497638 LMO1P25800 156 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 MAGEA3P43357 314 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 RAP1GDS1P52306 607 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 DSCR4P56555 118 aaPredicted RBP6.72□□□□□ -1.33
VPS45-210ENST00000497638 CLDN15P56746 228 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 CRYMQ14894 314 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 TBCCQ15814 346 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 NNATQ16517 81 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 PDK4Q16654 411 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 C18orf21Q32NC0 220 aaPredicted RBP6.72□□□□□ -1.33
VPS45-210ENST00000497638 RAET1LQ5VY80 246 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 ANKRD22Q5VYY1 191 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 OR52E8Q6IFG1 317 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 EXOC3L1Q86VI1 746 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 TCAIMQ8N3R3 496 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 NKAPQ8N5F7 415 aaKnown RBP6.72□□□□□ -1.33
VPS45-210ENST00000497638 METTL25Q8N6Q8 603 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 C3orf56Q8N813 242 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 BEND2Q8NDZ0 799 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 OR4K17Q8NGC6 315 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 C10orf105Q8TEF2 133 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 RGMAQ96B86 450 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 S100PBPQ96BU1 408 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 DCLRE1CQ96SD1 692 aaKnown RBP6.72□□□□□ -1.33
VPS45-210ENST00000497638 CACNG6Q9BXT2 260 aa6.72□□□□□ -1.33
VPS45-210ENST00000497638 HDHD5Q9BXW7 423 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms