RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	HNRNPA3	P51991	378 aa	Known RBP	3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	SRY	Q05066	204 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	EBI3	Q14213	229 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	KCNJ11	Q14654	390 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	INA	Q16352	499 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	CYBRD1	Q53TN4	286 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	GET4	Q7L5D6	327 aa	Predicted RBP	3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	P4HA3	Q7Z4N8	544 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	NET1	Q7Z628	596 aa	Predicted RBP	3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	TMEM110	Q86TL2	294 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	FBXO30	Q8TB52	745 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	SELENOM	Q8WWX9	145 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	TESK2	Q96S53	571 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	PNO1	Q9NRX1	252 aa	Known RBP	3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	GDAP2	Q9NXN4	497 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	ATXN10	Q9UBB4	475 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	MGAT4B	Q9UQ53	548 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	ATP8B3	O60423	1300 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	ANKRD30B	Q9BXX2	1392 aa		3.59	□□□□□ -1.83
TARDBP-210	ENST00000496840	TTC26	A0AVF1	554 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840		E9PLD3	99 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840		K7ENP7	123 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	TM9SF1	O15321	606 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	TIMP1	P01033	207 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	CA3	P07451	260 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	ANXA4	P09525	319 aa	Predicted RBP	3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	SLC35G4	P0C7Q5	338 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	RRAS	P10301	218 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	CDH5	P33151	784 aa	Predicted RBP	3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	HSF2	Q03933	536 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	LRRC63	Q05C16	580 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	EGFEM1P	Q0D2K5	195 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	CDKN3	Q16667	212 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	SLC39A4	Q6P5W5	647 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	CATSPER4	Q7RTX7	472 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	ERAS	Q7Z444	233 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	ANKRD49	Q8WVL7	239 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	NEIL2	Q969S2	332 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	TMEM80	Q96HE8	168 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	GLIPR2	Q9H4G4	154 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	KAT8	Q9H7Z6	458 aa	Known RBP	3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	LIN28A	Q9H9Z2	209 aa	Known RBP	3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	VAT1L	Q9HCJ6	419 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	TRPV5	Q9NQA5	729 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	MARCH5	Q9NX47	278 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	DUS2	Q9NX74	493 aa	Known RBP	3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	DUSP12	Q9UNI6	340 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	AURKC	Q9UQB9	309 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	PARD3	Q8TEW0	1356 aa		3.58	□□□□□ -1.84
TARDBP-210	ENST00000496840	IGLV3-16	A0A075B6K0	115 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	IGKV6-21	A0A0C4DH24	114 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	ANKRD30BL	A7E2S9	258 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840		H3BTX0	84 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	VPS26A	O75436	327 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	CD55	P08174	381 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	MET	P08581	1390 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	TSPAN8	P19075	237 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	HOXD10	P28358	340 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	ADRA1A	P35348	466 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	TLE4	Q04727	773 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	PDZK1IP1	Q13113	114 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	EXOSC2	Q13868	293 aa	Known RBP	3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	TFDP1	Q14186	410 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	MISP	Q8IVT2	679 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	HAVCR1	Q96D42	359 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	GPN2	Q9H9Y4	310 aa	Predicted RBP	3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	ANKMY1	Q9P2S6	941 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840	GHRL	Q9UBU3	117 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840		U3KQV3	271 aa		3.57	□□□□□ -1.84
TARDBP-210	ENST00000496840		A0A1B0GUL7	405 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	LRRC30	A6NM36	301 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840		K7EPI3	171 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	SCGB2A1	O75556	95 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	BBOX1	O75936	387 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	ANP32D	O95626	131 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	DIRAS3	O95661	229 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	PTGFR	P43088	359 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	PPOX	P50336	477 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	MTTP	P55157	894 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	POLR2F	P61218	127 aa	Known RBP	3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	BEND6	Q5SZJ8	279 aa	Predicted RBP	3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	ARSK	Q6UWY0	536 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	LHFPL4	Q7Z7J7	247 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	VPS36	Q86VN1	386 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	ZBTB44	Q8NCP5	570 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	ARNTL2	Q8WYA1	636 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	TAF4B	Q92750	862 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	IL22RA2	Q969J5	263 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	TBC1D31	Q96DN5	1066 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	MRPL13	Q9BYD1	178 aa	Known RBP	3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	RPAP3	Q9H6T3	665 aa	Predicted RBP	3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	CYTL1	Q9NRR1	136 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	SPRR3	Q9UBC9	169 aa		3.56	□□□□□ -1.84
TARDBP-210	ENST00000496840	CUX2	O14529	1486 aa		3.55	□□□□□ -1.84
TARDBP-210	ENST00000496840		A0A1B0GUA9	196 aa		3.55	□□□□□ -1.84
TARDBP-210	ENST00000496840	SDHD	O14521	159 aa		3.55	□□□□□ -1.84
TARDBP-210	ENST00000496840	SMPD2	O60906	423 aa		3.55	□□□□□ -1.84
TARDBP-210	ENST00000496840	AK1	P00568	194 aa		3.55	□□□□□ -1.84

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