RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 GIN1Q9NXP7 522 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 SNX8Q9Y5X2 465 aa12.83□□□□□ -0.36
VTI1A-209ENST00000496445 A0A087WZY1 265 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 NPIPA5A0A0B4J1W7 369 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 A0A1W2PQD3 144 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 C7orf72A4D263 438 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 NPIPA7E9PJI5 369 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 SCDO00767 359 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 EIF1AYO14602 144 aaKnown RBP12.82□□□□□ -0.36
VTI1A-209ENST00000496445 SIAH2O43255 324 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 SMNDC1O75940 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
VTI1A-209ENST00000496445 GOSR1O95249 250 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 NPIPA8P0DM63 369 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 G6PDP11413 515 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 DDX5P17844 614 aaKnown RBP12.82□□□□□ -0.36
VTI1A-209ENST00000496445 DNASE1P24855 282 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 SLC6A8P48029 635 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 RNF144AP50876 292 aaPredicted RBP12.82□□□□□ -0.36
VTI1A-209ENST00000496445 C21orf58P58505 322 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 ZNF117Q03924 483 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 TP53BP2Q13625 1128 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 KRT71Q3SY84 523 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
VTI1A-209ENST00000496445 CDC73Q6P1J9 531 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 NUDCD3Q8IVD9 361 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 ZNF781Q8N8C0 355 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 OR56A1Q8NGH5 318 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 OR5AK3PQ8NH89 298 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 SFXN5Q8TD22 340 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 ZBTB8AQ96BR9 441 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 RNF145Q96MT1 663 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 TMUB1Q9BVT8 246 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 BHLHE41Q9C0J9 482 aaPredicted RBP12.82□□□□□ -0.36
VTI1A-209ENST00000496445 C20orf27Q9GZN8 174 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 PIGUQ9H490 435 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 UBQLN4Q9NRR5 601 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 KCNE3Q9Y6H6 103 aa12.82□□□□□ -0.36
VTI1A-209ENST00000496445 RAI1Q7Z5J4 1906 aaPredicted RBP12.82□□□□□ -0.36
VTI1A-209ENST00000496445 NIPBLQ6KC79 2804 aaeCLIP12.81□□□□□ -0.36
VTI1A-209ENST00000496445 WDR91A4D1P6 747 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 CTIFO43310 598 aaKnown RBP12.81□□□□□ -0.36
VTI1A-209ENST00000496445 OIP5O43482 229 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 HSPA4LO95757 839 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 SERPINE1P05121 402 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 LINGO3P0C6S8 592 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 IL11P20809 199 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 PRPS1L1P21108 318 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 CD79BP40259 229 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 EIF1AXP47813 144 aaKnown RBP12.81□□□□□ -0.36
VTI1A-209ENST00000496445 CCT3P49368 545 aaKnown RBP12.81□□□□□ -0.36
VTI1A-209ENST00000496445 PCYT1AP49585 367 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 RIPPLY3P57055 190 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 RPS3AP61247 264 aaKnown RBP12.81□□□□□ -0.36
VTI1A-209ENST00000496445 PDCD2Q16342 344 aaPredicted RBP12.81□□□□□ -0.36
VTI1A-209ENST00000496445 DCST2Q5T1A1 773 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 FBXW10Q5XX13 1052 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 CAMKMTQ7Z624 323 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 MISPQ8IVT2 679 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 OR10D3Q8NH80 312 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 B4GALNT2Q8NHY0 566 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 ACTRT2Q8TDY3 377 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 MBD6Q96DN6 1003 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 CHMP6Q96FZ7 201 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 PPP1R36Q96LQ0 422 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 ALPK1Q96QP1 1244 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 SORT1Q99523 831 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 DUSP26Q9BV47 211 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 ACTRT3Q9BYD9 372 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 PARD6BQ9BYG5 372 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 SERHL2Q9H4I8 314 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 NEUROD4Q9HD90 331 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 ATAD3AQ9NVI7 634 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 ASIC5Q9NY37 505 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 HEATR5AQ86XA9 2040 aa12.81□□□□□ -0.36
VTI1A-209ENST00000496445 NPIPB9F8W1W9 429 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 RGS16O15492 202 aaPredicted RBP12.8□□□□□ -0.36
VTI1A-209ENST00000496445 OPN1LWP04000 364 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 RAF1P04049 648 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 DHRS4L1P0CG22 281 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 CD8BP10966 210 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 FCGR2AP12318 317 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 HPGDP15428 266 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 ZNF41P51814 821 aaPredicted RBP12.8□□□□□ -0.36
VTI1A-209ENST00000496445 ABCE1P61221 599 aaKnown RBP12.8□□□□□ -0.36
VTI1A-209ENST00000496445 HBA1P69905 142 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 EMX2Q04743 252 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 FOXF1Q12946 379 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 CHI3L2Q15782 390 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 TNFAIP8L3Q5GJ75 292 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 CBLN3Q6UW01 205 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 NATD1Q8N6N6 113 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 OR5D16Q8NGK9 328 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 ZBTB9Q96C00 473 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 WFIKKN1Q96NZ8 548 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 TMEM185BQ9H7F4 350 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 HHATLQ9HCP6 504 aa12.8□□□□□ -0.36
VTI1A-209ENST00000496445 SSU72Q9NP77 194 aaKnown RBP12.8□□□□□ -0.36
VTI1A-209ENST00000496445 KLHL28Q9NXS3 571 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms