RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 RING1Q06587 406 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SMCO1Q147U7 214 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 SGCAQ16586 387 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 KLHL36Q8N4N3 616 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 FBXO15Q8NCQ5 510 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 OR52N2Q8NGI0 321 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 GOT1L1Q8NHS2 421 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 THAP6Q8TBB0 222 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 VN1R3Q9BXE9 311 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 CHIAQ9BZP6 476 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ZYG11BQ9C0D3 744 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 EGLN1Q9GZT9 426 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ALX4Q9H161 411 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 P2RY12Q9H244 342 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 MARCH5Q9NX47 278 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 NTMQ9P121 344 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 ABRACLQ9P1F3 81 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 STOX2Q9P2F5 926 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 PCDHB9Q9Y5E1 797 aa8.5□□□□□ -1.05
HPS4-217ENST00000496385 TIMM13Q9Y5L4 95 aaPredicted RBP8.5□□□□□ -1.05
HPS4-217ENST00000496385 ARPC5O15511 151 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 LRATO95237 230 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 KCNE1P15382 129 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 DGKAP23743 735 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 MNDAP41218 407 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 SLC1A3P43003 542 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 FNTBP49356 437 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 CDK5Q00535 292 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 GPM6BQ13491 265 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 XKR4Q5GH76 650 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 EOGTQ5NDL2 527 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 THEM5Q8N1Q8 247 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 POGLUT1Q8NBL1 392 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 GPR156Q8NFN8 814 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 OR4K2Q8NGD2 314 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 SMIM4Q8WVI0 70 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 MYLIPQ8WY64 445 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 CLP1Q92989 425 aaKnown RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 CXorf40BQ96DE9 158 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 SEMA3CQ99985 751 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 GPR62Q9BZJ7 368 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 SLC32A1Q9H598 525 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 TBC1D17Q9HA65 648 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 PRMT8Q9NR22 394 aaPredicted RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 KLHL1Q9NR64 748 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 C14orf105Q9NVL8 296 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 RUVBL1Q9Y265 456 aaKnown RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 PLEKHM1Q9Y4G2 1056 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 A0A0D9SG52 128 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 RHPN2P1A8MT19 583 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 RNASET2O00584 256 aaKnown RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 ZNF749O43361 778 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 PCDH7O60245 1069 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 C1QCP02747 245 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 PRSS56P0CW18 603 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 TNFRSF1BP20333 461 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 LPOP22079 712 aaPredicted RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 FEN1P39748 380 aaKnown RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 GIPRP48546 466 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 PCBP3P57721 371 aaKnown RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 SNRPEP62304 92 aaKnown RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 DEFA6Q01524 100 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 PTPRRQ15256 657 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 UPP1Q16831 310 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 FAM74A1Q5RGS3 127 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 OR5M10Q6IEU7 315 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 TRIM40Q6P9F5 258 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 FAM111BQ6SJ93 734 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 KRT77Q7Z794 578 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 SLC9B2Q86UD5 537 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 CLECL1Q8IZS7 167 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 HJURPQ8NCD3 748 aaPredicted RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 RFKQ969G6 155 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 MAL2Q969L2 176 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 CPNE4Q96A23 557 aaPredicted RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 RAB7BQ96AH8 199 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 TMEM169Q96HH4 297 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 TMED9Q9BVK6 235 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 TM6SF2Q9BZW4 377 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 QRSL1Q9H0R6 528 aaKnown RBP8.49□□□□□ -1.05
HPS4-217ENST00000496385 CSNK1G1Q9HCP0 422 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 SLC22A11Q9NSA0 550 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 TMEM248Q9NWD8 314 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 OPN4Q9UHM6 478 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 ANGPT4Q9Y264 503 aa8.49□□□□□ -1.05
HPS4-217ENST00000496385 LOC390937A0A1W2PQ73 354 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 TRBC2A0A5B9 178 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 MEX3AA1L020 520 aaKnown RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 C2orf78A6NCI8 922 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 OR6C68A6NDL8 312 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 C1orf196B1AJZ1 125 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 GPR31O00270 319 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 LILRB5O75023 590 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 POP7O75817 140 aaKnown RBP8.48□□□□□ -1.05
HPS4-217ENST00000496385 OPN1SWP03999 348 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 URODP06132 367 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 CD3GP09693 182 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 CELP19835 753 aa8.48□□□□□ -1.05
HPS4-217ENST00000496385 HTR2AP28223 471 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms