RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 IFI30P13284 250 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 PRG2P13727 222 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 FGF9P31371 208 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 NUDT1P36639 197 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 MAP3K8P41279 467 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 RPS25P62851 125 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ACSM1Q08AH1 577 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 MGAT2Q10469 447 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 HNRNPA0Q13151 305 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 FLYWCH1Q4VC44 716 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ZNF613Q6PF04 617 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 CXXC5Q7LFL8 322 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 OR8H2Q8N162 312 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 OR4F15Q8NGB8 312 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 OR52R1Q8NGF1 315 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 OR52N1Q8NH53 320 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 SETD6Q8TBK2 473 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ZDHHC1Q8WTX9 485 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ASB15Q8WXK1 588 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 HPS1Q92902 700 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 ANKRD9Q96BM1 317 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 MSANTD3Q96H12 275 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 HS6ST2Q96MM7 605 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 SECISBP2Q96T21 854 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 RERGLQ9H628 205 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 STARD5Q9NSY2 213 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 TNFRSF10DQ9UBN6 386 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 POMT2Q9UKY4 750 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 CBLCQ9ULV8 474 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 SF3B6Q9Y3B4 125 aaKnown RBP10.28□□□□□ -0.76
CMSS1-208ENST00000496116 MED31Q9Y3C7 131 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 CSNK1G3Q9Y6M4 447 aa10.28□□□□□ -0.76
CMSS1-208ENST00000496116 NPIPA5A0A0B4J1W7 369 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 TRDV1A0A1B0GX56 115 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 FAM86C2PA6NEL3 165 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 NPIPA7E9PJI5 369 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 SNPHO15079 494 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 RDH16O75452 317 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 HLA-DPB1P04440 258 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 NPIPA8P0DM63 369 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 TYRP1P17643 537 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 BMP8BP34820 402 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 FZD2Q14332 565 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 AMZ1Q400G9 498 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 ARMC4Q5T2S8 1044 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 BMP8AQ7Z5Y6 402 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 PARGQ86W56 976 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF761Q86XN6 746 aaPredicted RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 CPOQ8IVL8 374 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 SFTPA2Q8IWL1 248 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 LAX1Q8IWV1 398 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 C19orf47Q8N9M1 422 aaKnown RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 FAM174AQ8TBP5 190 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 OTULINQ96BN8 352 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 ABHD8Q96I13 439 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 SDHCQ99643 169 aaPredicted RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF559Q9BR84 538 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 JAM3Q9BX67 310 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 HINT3Q9NQE9 182 aaKnown RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 FBXO34Q9NWN3 711 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 KCNE5Q9UJ90 142 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF223Q9UK11 482 aaPredicted RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 PAIP2BQ9ULR5 123 aaKnown RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 MRPS33Q9Y291 106 aaKnown RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 CEP290O15078 2479 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 C2CD4DB7Z1M9 353 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 AQP9O43315 295 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 KCNK2O95069 426 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 SLC2A10O95528 541 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 MSL3P1P0C860 447 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 SAGP10523 405 aaPredicted RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 ST6GAL1P15907 406 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 PTNP21246 168 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 DRD5P21918 477 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 SDC2P34741 201 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 PPP1CAP62136 330 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 C1orf61Q13536 156 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 DDI2Q5TDH0 399 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 DESI1Q6ICB0 168 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 CD200R1LQ6Q8B3 271 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 CCBE1Q6UXH8 406 aaPredicted RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 TMPRSS11FQ6ZWK6 438 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 ZNF485Q8NCK3 441 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 BBS1Q8NFJ9 593 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 OR9A4Q8NGU2 314 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 PFN4Q8NHR9 129 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 BPIFA2Q96DR5 249 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 KLHDC7BQ96G42 594 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 RBM18Q96H35 190 aaKnown RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 TM9SF2Q99805 663 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 GPR174Q9BXC1 333 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 GPR27Q9NS67 375 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 C14orf119Q9NWQ9 140 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 YARS2Q9Y2Z4 477 aaKnown RBP10.27□□□□□ -0.77
CMSS1-208ENST00000496116 V9GYH0 126 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 SZT2Q5T011 3432 aa10.27□□□□□ -0.77
CMSS1-208ENST00000496116 A0A1W2PPC4 97 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 GXYLT2A0PJZ3 443 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 BLACEA4D250 179 aa10.26□□□□□ -0.77
CMSS1-208ENST00000496116 B4DGG1 531 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms