RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 VLDLRP98155 873 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 CD47Q08722 323 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 PEX6Q13608 980 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 TPSAB1Q15661 275 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 NDUFA9Q16795 377 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 CCDC152Q4G0S7 254 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 FAM120AOSQ5T036 256 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 RNLSQ5VYX0 342 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 FAHD2BQ6P2I3 314 aaPredicted RBP4.19□□□□□ -1.74
SSR3-208ENST00000496050 RGS9BPQ6ZS82 235 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 KIAA1328Q86T90 577 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 TMEM110Q86TL2 294 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 MYPOPQ86VE0 399 aaPredicted RBP4.19□□□□□ -1.74
SSR3-208ENST00000496050 LRRC43Q8N309 656 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 CLDN19Q8N6F1 224 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 SYT14Q8NB59 555 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 RHOXF1Q8NHV9 184 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 CCDC26Q8TAB7 109 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 M1APQ8TC57 530 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 TRUB1Q8WWH5 349 aaKnown RBP4.19□□□□□ -1.74
SSR3-208ENST00000496050 FAHD2AQ96GK7 314 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 TMEM80Q96HE8 168 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 OR5B2Q96R09 309 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 SLC6A7Q99884 636 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 DUSP16Q9BY84 665 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 GORASP2Q9H8Y8 452 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 NPIPA1Q9UND3 350 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 RPH3ALQ9UNE2 315 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 MAB21L2Q9Y586 359 aa4.19□□□□□ -1.74
SSR3-208ENST00000496050 CLRN2A0PK11 232 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 MTX2O75431 263 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 IQCF3P0C7M6 154 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 CPN1P15169 458 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 SERPINA2P20848 420 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 GATA2P23769 480 aaPredicted RBP4.18□□□□□ -1.74
SSR3-208ENST00000496050 SLC25A1P53007 311 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 EWSR1Q01844 656 aaKnown RBP eCLIP4.18□□□□□ -1.74
SSR3-208ENST00000496050 ASAH1Q13510 395 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 SERTAD2Q14140 314 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 Q1RN00 199 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 SERPINA9Q86WD7 417 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 NAXDQ8IW45 347 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 ZNF683Q8IZ20 524 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 SLC39A11Q8N1S5 342 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 C15orf54Q8N8G6 183 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 STEAP2Q8NFT2 490 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 OR52M1Q8NGK5 317 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 OR9A4Q8NGU2 314 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 FOXN4Q96NZ1 517 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 CCT8L2Q96SF2 557 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 CRNKL1Q9BZJ0 848 aaKnown RBP4.18□□□□□ -1.74
SSR3-208ENST00000496050 PPDPFQ9H3Y8 114 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 PNO1Q9NRX1 252 aaKnown RBP4.18□□□□□ -1.74
SSR3-208ENST00000496050 RSPH14Q9UHP6 348 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 OARD1Q9Y530 152 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 FRMPD4Q14CM0 1322 aa4.18□□□□□ -1.74
SSR3-208ENST00000496050 ANKRD30BQ9BXX2 1392 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 ZNF354AO60765 605 aaPredicted RBP4.17□□□□□ -1.74
SSR3-208ENST00000496050 DUSP14O95147 198 aaKnown RBP4.17□□□□□ -1.74
SSR3-208ENST00000496050 CD55P08174 381 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 H2BFMP0C1H6 154 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 SLC35E2P0CK97 266 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 CALB2P22676 271 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 UQCRC2P22695 453 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 RPL32P62910 135 aaKnown RBP4.17□□□□□ -1.74
SSR3-208ENST00000496050 KRTAP1-1Q07627 177 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 GPM6BQ13491 265 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 DPYSL3Q14195 570 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 TGIF1Q15583 401 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 SLC1A5Q15758 541 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 GLYR1Q49A26 553 aaPredicted RBP4.17□□□□□ -1.74
SSR3-208ENST00000496050 TMEM52BQ4KMG9 183 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 TCTEX1D4Q5JR98 221 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 ATAD3CQ5T2N8 411 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 MARC1Q5VT66 337 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 TTC23Q5W5X9 447 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 SLC22A10Q63ZE4 541 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 TMEM225Q6GV28 225 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 PYHIN1Q6K0P9 492 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 ACSM5Q6NUN0 579 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 FAM71F2Q6NXP2 309 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 CASC1Q6TDU7 716 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 KDELC1Q6UW63 502 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 C9orf40Q8IXQ3 194 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 SLC38A6Q8IZM9 456 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 CADM2Q8N3J6 435 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 ANKFN1Q8N957 763 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 STXBP6Q8NFX7 210 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 OR10A7Q8NGE5 316 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 RPL3LQ92901 407 aaKnown RBP4.17□□□□□ -1.74
SSR3-208ENST00000496050 SH3YL1Q96HL8 342 aaPredicted RBP4.17□□□□□ -1.74
SSR3-208ENST00000496050 RIT2Q99578 217 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 CCT7Q99832 543 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 TSSK1BQ9BXA7 367 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 TBK1Q9UHD2 729 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 LCMT1Q9UIC8 334 aa4.17□□□□□ -1.74
SSR3-208ENST00000496050 PTCH1Q13635 1447 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 MSH4O15457 936 aa4.16□□□□□ -1.74
SSR3-208ENST00000496050 UGT2B17O75795 530 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms