RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RNF144AP50876 292 aaPredicted RBP29.95■■■□□ 2.39
CBX4-203ENST00000494546 ATG16L1Q676U5 607 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 C6orf120Q7Z4R8 191 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 PINK1Q9BXM7 581 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 CRIM1Q9NZV1 1036 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 AP4B1Q9Y6B7 739 aa29.95■■■□□ 2.39
CBX4-203ENST00000494546 CSMD1Q96PZ7 3565 aa29.95■■■□□ 2.38
CBX4-203ENST00000494546 NUP214P35658 2090 aaPredicted RBP29.94■■■□□ 2.38
CBX4-203ENST00000494546 A0A087WZY1 265 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 CPSF4O95639 269 aaKnown RBP29.94■■■□□ 2.38
CBX4-203ENST00000494546 MATN1P21941 496 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 ZNF41P51814 821 aaPredicted RBP29.94■■■□□ 2.38
CBX4-203ENST00000494546 CLNS1AP54105 237 aaKnown RBP29.94■■■□□ 2.38
CBX4-203ENST00000494546 NME5P56597 212 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 TMEM44Q2T9K0 475 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 FLYWCH1Q4VC44 716 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 ANXA8L1Q5VT79 327 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 OGFOD2Q6N063 350 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 ZNF527Q8NB42 609 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 PHOSPHO1Q8TCT1 267 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 TESCQ96BS2 214 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 HOXD1Q9GZZ0 328 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 MED17Q9NVC6 651 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 JKAMPQ9P055 326 aa29.94■■■□□ 2.38
CBX4-203ENST00000494546 HDAC3O15379 428 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 ALDOCP09972 364 aaKnown RBP29.93■■■□□ 2.38
CBX4-203ENST00000494546 PHC1P78364 1004 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 CASP8Q14790 479 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 SPANXN4Q5MJ08 99 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 LUZP2Q86TE4 346 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 VPS37AQ8NEZ2 397 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 B4GALNT2Q8NHY0 566 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 ACTRT2Q8TDY3 377 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 FIG4Q92562 907 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 SLC35G5Q96KT7 338 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 SERHL2Q9H4I8 314 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 WDR55Q9H6Y2 383 aaPredicted RBP29.93■■■□□ 2.38
CBX4-203ENST00000494546 MANSC1Q9H8J5 431 aa29.93■■■□□ 2.38
CBX4-203ENST00000494546 PDZD2O15018 2839 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 GOLGA8QA0A0J9YX86 632 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 PRSS51A0A1B0GVH4 220 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 GOLGA8OA6NCC3 632 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 TRPC5OSA6NMA1 111 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 GOLGA8NF8WBI6 632 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 SCN2BO60939 215 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 TNFRSF21O75509 655 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 ZNF17P17021 662 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 CPA2P48052 419 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 RPS3AP61247 264 aaKnown RBP29.92■■■□□ 2.38
CBX4-203ENST00000494546 KIF18BQ86Y91 864 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 WDR75Q8IWA0 830 aaKnown RBP29.92■■■□□ 2.38
CBX4-203ENST00000494546 ZNF614Q8N883 585 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 RAB3IL1Q8TBN0 382 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 ZNF845Q96IR2 970 aaPredicted RBP29.92■■■□□ 2.38
CBX4-203ENST00000494546 NPAS1Q99742 590 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 KLHDC3Q9BQ90 382 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 RBM24Q9BX46 236 aaKnown RBP29.92■■■□□ 2.38
CBX4-203ENST00000494546 STOML1Q9UBI4 398 aa29.92■■■□□ 2.38
CBX4-203ENST00000494546 A0A1W2PNV4 684 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 EPHA3P29320 983 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 CASP9P55211 416 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 DPY19L1Q2PZI1 675 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 PLPPR5Q32ZL2 321 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 FAM174BQ3ZCQ3 159 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 KLHL26Q53HC5 615 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 OR2A2Q6IF42 318 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 SPATA19Q7Z5L4 167 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 CDH24Q86UP0 819 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 GTPBP8Q8N3Z3 284 aaPredicted RBP29.91■■■□□ 2.38
CBX4-203ENST00000494546 ZBTB8AQ96BR9 441 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 AIG1Q9NVV5 245 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 ITGB1BP2Q9UKP3 347 aa29.91■■■□□ 2.38
CBX4-203ENST00000494546 DUXAA6NLW8 204 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 E9PBE3 544 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 H3BNH8 94 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 S100A3P33764 101 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 ATP12AP54707 1039 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 UFM1P61960 85 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 EEF1A1P68104 462 aaKnown RBP29.9■■■□□ 2.38
CBX4-203ENST00000494546 ZNF117Q03924 483 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 PON3Q15166 354 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 SGCBQ16585 318 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 EEF1A1P5Q5VTE0 462 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 MTERF4Q7Z6M4 381 aaKnown RBP29.9■■■□□ 2.38
CBX4-203ENST00000494546 METTL25Q8N6Q8 603 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 CNEP1R1Q8N9A8 125 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 TEX37Q96LM6 180 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 RNF145Q96MT1 663 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 SDF2Q99470 211 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 PIGMQ9H3S5 423 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 PACSIN3Q9UKS6 424 aa29.9■■■□□ 2.38
CBX4-203ENST00000494546 TNFSF12-TNFSF13A0A0A6YY99 330 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 TUBAL3A6NHL2 446 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 EIF1AYO14602 144 aaKnown RBP29.89■■■□□ 2.38
CBX4-203ENST00000494546 TNFSF13O75888 250 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 UQCRC2P22695 453 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 DDX59Q5T1V6 619 aaKnown RBP eCLIP29.89■■■□□ 2.38
CBX4-203ENST00000494546 NXNQ6DKJ4 435 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 GGNQ86UU5 652 aa29.89■■■□□ 2.38
CBX4-203ENST00000494546 FNDC9Q8TBE3 224 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms