RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 OR52E4Q8NGH9 312 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 RASSF5Q8WWW0 418 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 CNOT9Q92600 299 aaKnown RBP17.74■□□□□ 0.43
USP39-218ENST00000493829 PMM1Q92871 262 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 OSBPL11Q9BXB4 747 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.74■□□□□ 0.43
USP39-218ENST00000493829 BAG5Q9UL15 447 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 ANKRD11Q6UB99 2663 aaPredicted RBP17.74■□□□□ 0.43
USP39-218ENST00000493829 hCG_2039718K7EN88 272 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 NDUFB5O43674 189 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 CEACAM4O75871 244 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 GKN3PP0CG01 181 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 UBL4AP11441 157 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 CCR4P51679 360 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 RHDQ02161 417 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 IFI44LQ53G44 452 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 EIPR1Q53HC9 387 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 RNF220Q5VTB9 566 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 OR5M10Q6IEU7 315 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 CARM1Q86X55 608 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 DND1Q8IYX4 353 aaKnown RBP17.74■□□□□ 0.43
USP39-218ENST00000493829 OR4D11Q8NGI4 311 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 HES7Q9BYE0 225 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 CNOT11Q9UKZ1 510 aaKnown RBP17.74■□□□□ 0.43
USP39-218ENST00000493829 ABCG2Q9UNQ0 655 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 CARD8Q9Y2G2 431 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 CSAG2Q9Y5P2 127 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 A0A0G2JMM0 328 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 A0A1W2PPB8 328 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 A0A1W2PRS3 328 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 CDHR4A6H8M9 788 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 OR5H15A6NDH6 313 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 KIR3DP1A8MWS1 328 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 ALG1L2C9J202 215 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 H3BNH8 94 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 GTPBP1O00178 669 aaKnown RBP17.73■□□□□ 0.43
USP39-218ENST00000493829 NGFRP08138 427 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 CASP3P42574 277 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 CLK3P49761 638 aaKnown RBP17.73■□□□□ 0.43
USP39-218ENST00000493829 GPR85P60893 370 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 RPP38P78345 283 aaKnown RBP17.73■□□□□ 0.43
USP39-218ENST00000493829 ELOAQ14241 798 aaKnown RBP17.73■□□□□ 0.43
USP39-218ENST00000493829 FAM98BQ52LJ0 330 aaKnown RBP17.73■□□□□ 0.43
USP39-218ENST00000493829 FNDC7Q5VTL7 733 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 SLC22A10Q63ZE4 541 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 LSRQ86X29 649 aaPredicted RBP17.73■□□□□ 0.43
USP39-218ENST00000493829 RBM45Q8IUH3 476 aaKnown RBP17.73■□□□□ 0.43
USP39-218ENST00000493829 GPALPP1Q8IXQ4 340 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 PSD4Q8NDX1 1056 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 PAQR8Q8TEZ7 354 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 STMN2Q93045 179 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.73■□□□□ 0.43
USP39-218ENST00000493829 KLHL1Q9NR64 748 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 DNAJB12Q9NXW2 375 aaKnown RBP17.73■□□□□ 0.43
USP39-218ENST00000493829 HRH3Q9Y5N1 445 aa17.73■□□□□ 0.43
USP39-218ENST00000493829 TNRC6AQ8NDV7 1962 aaKnown RBP17.72■□□□□ 0.43
USP39-218ENST00000493829 SLC25A12O75746 678 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 KRT36O76013 467 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 NEURL1O76050 574 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 GPIP06744 558 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 PTGDSP41222 190 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 RGS8P57771 180 aaPredicted RBP17.72■□□□□ 0.43
USP39-218ENST00000493829 ZNF117Q03924 483 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 INPP5JQ15735 1006 aaPredicted RBP17.72■□□□□ 0.43
USP39-218ENST00000493829 TBCELQ5QJ74 424 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 AP1ARQ63HQ0 302 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 DEF8Q6ZN54 512 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 GEMIN6Q8WXD5 167 aaKnown RBP17.72■□□□□ 0.43
USP39-218ENST00000493829 SLCO4A1Q96BD0 722 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 JSRP1Q96MG2 331 aaPredicted RBP17.72■□□□□ 0.43
USP39-218ENST00000493829 UGT2B28Q9BY64 529 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 SH2D2AQ9NP31 389 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 KLHL28Q9NXS3 571 aa17.72■□□□□ 0.43
USP39-218ENST00000493829 A0A1W2PQD3 144 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 ADAM10O14672 748 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 HCRTR2O43614 444 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 LGI1O95970 557 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 P04436 131 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 PRG2P13727 222 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 RYKP34925 604 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 YAP1P46937 504 aaKnown RBP17.71■□□□□ 0.43
USP39-218ENST00000493829 DNASE1L1P49184 302 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 CHRNB3Q05901 458 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 CBLN3Q6UW01 205 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 KDF1Q8NAX2 398 aaPredicted RBP17.71■□□□□ 0.43
USP39-218ENST00000493829 GOLM1Q8NBJ4 401 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 CATSPER1Q8NEC5 780 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 DUSP19Q8WTR2 217 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 SGCZQ96LD1 299 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 ARHGDIGQ99819 225 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 PRR14Q9BWN1 585 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 ARMC7Q9H6L4 198 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 TIMMDC1Q9NPL8 285 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 CTPS2Q9NRF8 586 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 SACM1LQ9NTJ5 587 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 PPP4R1LQ9P1A2 415 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 ZMIZ1Q9ULJ6 1067 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 SLC35A3Q9Y2D2 325 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 WIF1Q9Y5W5 379 aa17.71■□□□□ 0.43
USP39-218ENST00000493829 ZNF264O43296 627 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms