RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PRAMEF8Q5VWM4 474 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 PRAMEF7Q5VXH5 474 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 TIGD3Q6B0B8 471 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 OGFOD3Q6PK18 319 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 RPS27LQ71UM5 84 aaKnown RBP7.44□□□□□ -1.22
BRCA1-221ENST00000493795 MKXQ8IYA7 352 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 FAM173AQ9BQD7 235 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 ACKR4Q9NPB9 350 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 MYOTQ9UBF9 498 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 FTSJ1Q9UET6 329 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 PRELID3BQ9Y3B1 194 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 ALKQ9UM73 1620 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 SLIT1O75093 1534 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 UNGP13051 313 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-221ENST00000493795 ZNF44P15621 663 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 CTRB1P17538 263 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 TBPP20226 339 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 NUDT1P36639 197 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 PPT1P50897 306 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 SOWAHAQ2M3V2 549 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 TMEM244Q5VVB8 128 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 CTRB2Q6GPI1 263 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 DESI1Q6ICB0 168 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 GAREM2Q75VX8 874 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 IGFN1Q86VF2 1251 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 CHCHD4Q8N4Q1 142 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 ZNRF4Q8WWF5 429 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 BPIFA2Q96DR5 249 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 SMOC2Q9H3U7 446 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 WASH6PQ9NQA3 447 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 SLC39A9Q9NUM3 307 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 PLEK2Q9NYT0 353 aa7.44□□□□□ -1.22
BRCA1-221ENST00000493795 MEIS3P1A6NDR6 274 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 EGFP01133 1207 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 ALDOAP04075 364 aaKnown RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 TK1P04183 234 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 PROS1P07225 676 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 MYF6P23409 242 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 TACR3P29371 465 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 CA5AP35218 305 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 DBPQ10586 325 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 AADACL3Q5VUY0 350 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 SBSNQ6UWP8 590 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 COX15Q7KZN9 410 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 CD163Q86VB7 1156 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 OR4M1Q8NGD0 313 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 HPSE2Q8WWQ2 592 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 RAB7BQ96AH8 199 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 ARPC5LQ9BPX5 153 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 STEAP1Q9UHE8 339 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 POLHQ9Y253 713 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 KCTD3Q9Y597 815 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 NRP1O14786 923 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 PRICKLE3O43900 615 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 FBXO24O75426 580 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 HLA-AP01891 365 aaKnown RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 MT-ND4P03905 459 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 HOXB5P09067 269 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 GABRA2P47869 451 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 PAFAH1B3Q15102 231 aaKnown RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 MEP1BQ16820 701 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 PPP1R3AQ16821 1122 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 Q1RN00 199 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 MPEG1Q2M385 716 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 FAM74A1Q5RGS3 127 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 IL34Q6ZMJ4 242 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 DBX2Q6ZNG2 339 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 ZNF546Q86UE3 836 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 KDM8Q8N371 416 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 LIPHQ8WWY8 451 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 SAMD8Q96LT4 415 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 MAP3K3Q99759 626 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 PINK1Q9BXM7 581 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 HRASLSQ9HDD0 168 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 IL26Q9NPH9 171 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 THSD1Q9NS62 852 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 EHFQ9NZC4 300 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 B4GALT6Q9UBX8 382 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 MCTS1Q9ULC4 181 aaKnown RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 GPR52Q9Y2T5 361 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 NWD1Q149M9 1564 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 TCRBV21S2A2A0A5A6 115 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 KLHL33A6NCF5 533 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 CBY3A6NI87 242 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 CRYM-AS1A6NIL9 109 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 PPP1R2P9O14990 202 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 ENSAO43768 121 aaKnown RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 PRAMEF11O60813 436 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 FBXO45P0C2W1 286 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 HLA-EP13747 358 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 ACPPP15309 386 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 ZNF28P17035 718 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 M6PRP20645 277 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 LAP3P28838 519 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 TRHRP34981 398 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 DIO3P55073 304 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 CXADRP78310 365 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 SNTB1Q13884 538 aaKnown RBP7.43□□□□□ -1.22
BRCA1-221ENST00000493795 GRM7Q14831 915 aa7.43□□□□□ -1.22
BRCA1-221ENST00000493795 KCNJ8Q15842 424 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms