RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 ANKRD31Q8N7Z5 1873 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 USP42Q9H9J4 1324 aaKnown RBP4.4□□□□□ -1.71
SMG7-208ENST00000493609 MAST2Q6P0Q8 1798 aa4.4□□□□□ -1.71
SMG7-208ENST00000493609 TNRC6CQ9HCJ0 1690 aaKnown RBP4.39□□□□□ -1.71
SMG7-208ENST00000493609 TSC22D2O75157 780 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 PTBP3O95758 552 aaKnown RBP4.39□□□□□ -1.71
SMG7-208ENST00000493609 ALPIP09923 528 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 LAMP1P11279 417 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 TSPAN8P19075 237 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 ARHGDIBP52566 201 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 HERVK_113P63132 956 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 ERVK-8P63133 956 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 EIF2B1Q14232 305 aaKnown RBP4.39□□□□□ -1.71
SMG7-208ENST00000493609 BEND6Q5SZJ8 279 aaPredicted RBP4.39□□□□□ -1.71
SMG7-208ENST00000493609 ZCCHC12Q6PEW1 402 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 COPS6Q7L5N1 327 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 GPD1LQ8N335 351 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 HDDC3Q8N4P3 179 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 MINDY2Q8NBR6 621 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 FNDC8Q8TC99 324 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 VN1R17PQ8TDU5 208 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 GTSF1Q8WW33 167 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 FCGR1BQ92637 280 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 C11orf24Q96F05 449 aaPredicted RBP4.39□□□□□ -1.71
SMG7-208ENST00000493609 PPP1R16AQ96I34 528 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 C9orf85Q96MD7 179 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 ERVK-6Q9BXR3 956 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 DCAF13Q9NV06 445 aaKnown RBP4.39□□□□□ -1.71
SMG7-208ENST00000493609 BRCA1P38398 1863 aaKnown RBP4.39□□□□□ -1.71
SMG7-208ENST00000493609 CARMIL3Q8ND23 1372 aa4.39□□□□□ -1.71
SMG7-208ENST00000493609 MYH7P12883 1935 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 ZNF609O15014 1411 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 A0A1B0GVY2 172 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 NPIPA2E9PIF3 369 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 H0YL77 283 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 EIF2S2P20042 333 aaKnown RBP4.38□□□□□ -1.71
SMG7-208ENST00000493609 PTPN6P29350 595 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 MAGEA9P43362 315 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 CEBPEQ15744 281 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 KRT71Q3SY84 523 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 MARC1Q5VT66 337 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 GCNT7Q6ZNI0 430 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 PAQR9Q6ZVX9 377 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 HSCBQ8IWL3 235 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 CCDC36Q8IYA8 594 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 NCLNQ969V3 563 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 MRPL38Q96DV4 380 aaKnown RBP4.38□□□□□ -1.71
SMG7-208ENST00000493609 CCT8L2Q96SF2 557 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 CARD6Q9BX69 1037 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 NMNAT2Q9BZQ4 307 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 RAB17Q9H0T7 212 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 ROPN1Q9HAT0 212 aaPredicted RBP4.38□□□□□ -1.71
SMG7-208ENST00000493609 P2RX2Q9UBL9 471 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 GHRLQ9UBU3 117 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 ODF2LQ9ULJ1 636 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 NTNG1Q9Y2I2 539 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 DHRS7Q9Y394 339 aa4.38□□□□□ -1.71
SMG7-208ENST00000493609 PSME4Q14997 1843 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 MYH13Q9UKX3 1938 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 IGLV3-10A0A075B6K4 115 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 LGALS8O00214 317 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 RASGRF2O14827 1237 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 CIAO1O76071 339 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 GJB5O95377 273 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 SLC35G4P0C7Q5 338 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 SLC35E2P0CK97 266 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 PGAM2P15259 253 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 FUT1P19526 365 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 CCNA2P20248 432 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 FASP25445 335 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 MRPS6P82932 125 aaKnown RBP4.37□□□□□ -1.71
SMG7-208ENST00000493609 ZP4Q12836 540 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 SPP2Q13103 211 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 RAB35Q15286 201 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 TOR1AIP1Q5JTV8 583 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 DMKNQ6E0U4 476 aaPredicted RBP4.37□□□□□ -1.71
SMG7-208ENST00000493609 CGB2Q6NT52 195 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 IRGCQ6NXR0 463 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 BAIAP2L2Q6UXY1 529 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 ZNF562Q6V9R5 426 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 HACD2Q6Y1H2 254 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 FAM71CQ8NEG0 241 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 MCHR2Q969V1 340 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 KRT23Q9C075 422 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 C1orf21Q9H246 121 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 YAE1D1Q9NRH1 226 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 FAM120CQ9NX05 1096 aaKnown RBP4.37□□□□□ -1.71
SMG7-208ENST00000493609 VSIG4Q9Y279 399 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 AGRNO00468 2067 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 TTC41PQ6P2S7 1318 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 UBN2Q6ZU65 1347 aa4.37□□□□□ -1.71
SMG7-208ENST00000493609 ZNF646O15015 1829 aaPredicted RBP4.37□□□□□ -1.71
SMG7-208ENST00000493609 AKAP11Q9UKA4 1901 aa4.36□□□□□ -1.71
SMG7-208ENST00000493609 TTC26A0AVF1 554 aa4.36□□□□□ -1.71
SMG7-208ENST00000493609 A8MX80 341 aa4.36□□□□□ -1.71
SMG7-208ENST00000493609 G3V3Y1 287 aa4.36□□□□□ -1.71
SMG7-208ENST00000493609 PRPSAP2O60256 369 aa4.36□□□□□ -1.71
SMG7-208ENST00000493609 LCMT2O60294 686 aaKnown RBP4.36□□□□□ -1.71
SMG7-208ENST00000493609 STAM2O75886 525 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms