RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SFTPDP35247 375 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 RNF144AP50876 292 aaPredicted RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 PSMD4P55036 377 aaKnown RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 CARD18P57730 90 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 HSPB3Q12988 150 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 SLC29A2Q14542 456 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 CD226Q15762 336 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 ZNF239Q16600 458 aaKnown RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 SFRP5Q5T4F7 317 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 ESPNLQ6ZVH7 1005 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 ZNF572Q7Z3I7 529 aaPredicted RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 RELL1Q8IUW5 271 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 LILRA2Q8N149 483 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 C17orf53Q8N3J3 647 aaPredicted RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 RNF128Q8TEB7 428 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 TMEM158Q8WZ71 300 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 HOXB13Q92826 284 aaPredicted RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 ZBTB8AQ96BR9 441 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 OTUB1Q96FW1 271 aaPredicted RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 TRAF4Q9BUZ4 470 aaPredicted RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 SHCBP1LQ9BZQ2 653 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 TRIM2Q9C040 744 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 GRPEL1Q9HAV7 217 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 FANCFQ9NPI8 374 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 PAQR5Q9NXK6 330 aaPredicted RBP12.17□□□□□ -0.46
SAMM50-204ENST00000493161 STOML1Q9UBI4 398 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 ZNF180Q9UJW8 692 aa12.17□□□□□ -0.46
SAMM50-204ENST00000493161 IGHV4-30-2A0A087WSY4 118 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 SERTM1A2A2V5 107 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 A8MV72 311 aaPredicted RBP12.16□□□□□ -0.46
SAMM50-204ENST00000493161 ZNF814B7Z6K7 855 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 OIP5O43482 229 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 NKX2-2O95096 273 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 ENO1P06733 434 aaKnown RBP12.16□□□□□ -0.46
SAMM50-204ENST00000493161 PRPS2P11908 318 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 TAC1P20366 129 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 IL32P24001 234 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 EDNRAP25101 427 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 GCAP28676 217 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 GSTM5P46439 218 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 PRIM2P49643 509 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 ZNF41P51814 821 aaPredicted RBP12.16□□□□□ -0.46
SAMM50-204ENST00000493161 PRKAG1P54619 331 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 PRKAA2P54646 552 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 PKNOX1P55347 436 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 LCP2Q13094 533 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 CHRFAM7AQ494W8 412 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 GLE1Q53GS7 698 aaKnown RBP12.16□□□□□ -0.46
SAMM50-204ENST00000493161 CCNJQ5T5M9 372 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 PIWIL2Q8TC59 973 aaKnown RBP12.16□□□□□ -0.46
SAMM50-204ENST00000493161 FAM110BQ8TC76 370 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 CIDECQ96AQ7 238 aaPredicted RBP12.16□□□□□ -0.46
SAMM50-204ENST00000493161 ZNF524Q96C55 264 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 GIMAP5Q96F15 307 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 KLHL15Q96M94 604 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 HDHD5Q9BXW7 423 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 GSTO2Q9H4Y5 243 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 ESRP2Q9H6T0 727 aaKnown RBP12.16□□□□□ -0.46
SAMM50-204ENST00000493161 C3orf14Q9HBI5 128 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 TNFRSF12AQ9NP84 129 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 NFU1Q9UMS0 254 aa12.16□□□□□ -0.46
SAMM50-204ENST00000493161 A0A096LNT2 108 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 SHISA9B4DS77 424 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 SSX4O60224 188 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 KCNK2O95069 426 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 NGFRP08138 427 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 SNRPAP09012 282 aaKnown RBP12.15□□□□□ -0.46
SAMM50-204ENST00000493161 LINGO3P0C6S8 592 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 ATP5F1P24539 256 aaPredicted RBP12.15□□□□□ -0.46
SAMM50-204ENST00000493161 CASQ1P31415 396 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 MANFP55145 182 aaKnown RBP12.15□□□□□ -0.46
SAMM50-204ENST00000493161 C21orf58P58505 322 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 FOXF1Q12946 379 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 DUSP5Q16690 384 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 ZNF385BQ569K4 471 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 TMEM201Q5SNT2 666 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 NOXRED1Q6NXP6 359 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 C8orf74Q6P047 294 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 DNAJC14Q6Y2X3 702 aaPredicted RBP12.15□□□□□ -0.46
SAMM50-204ENST00000493161 TRABD2AQ86V40 505 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 BANPQ8N9N5 519 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 SLC16A11Q8NCK7 471 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 ACTRT2Q8TDY3 377 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 HSD17B8Q92506 261 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 HTRA1Q92743 480 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 L3HYPDHQ96EM0 354 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 C16orf58Q96GQ5 468 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 MID1IP1Q9NPA3 183 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 KLHL13Q9P2N7 655 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 B3GALT5Q9Y2C3 310 aa12.15□□□□□ -0.46
SAMM50-204ENST00000493161 FREM1Q5H8C1 2179 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 IGHV3-15A0A0B4J1V0 119 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 EFNA1P20827 205 aaPredicted RBP12.14□□□□□ -0.47
SAMM50-204ENST00000493161 ENPP1P22413 925 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 ME2P23368 584 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 ZNF117Q03924 483 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 TOMM34Q15785 309 aaPredicted RBP12.14□□□□□ -0.47
SAMM50-204ENST00000493161 PDSS1Q5T2R2 415 aa12.14□□□□□ -0.47
SAMM50-204ENST00000493161 C6orf52Q5T4I8 152 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms