RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CDY1Q9Y6F8 540 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 CAPN6Q9Y6Q1 641 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 AKAP12Q02952 1782 aa3.9□□□□□ -1.78
BRCA1-220ENST00000492859 YLPM1P49750 1951 aaKnown RBP3.9□□□□□ -1.79
BRCA1-220ENST00000492859 FAM135BQ49AJ0 1406 aa3.9□□□□□ -1.79
BRCA1-220ENST00000492859 UHRF1BP1Q6BDS2 1440 aa3.9□□□□□ -1.79
BRCA1-220ENST00000492859 RRBP1Q9P2E9 1410 aaKnown RBP3.9□□□□□ -1.79
BRCA1-220ENST00000492859 CEMIPQ8WUJ3 1361 aa3.9□□□□□ -1.79
BRCA1-220ENST00000492859 WDR17Q8IZU2 1322 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PITPNM2Q9BZ72 1349 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ILVBLA1L0T0 632 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 HYKKA2RU49 373 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 A6NNC1 897 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DISC1C4P0D8 188 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 M0QZQ0 153 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 M0R036 132 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ADAM10O14672 748 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TGOLN2O43493 480 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SYNGR3O43761 229 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF217O75362 1048 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 IFNA10P01566 189 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 S100A8P05109 93 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 UCHL3P15374 230 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ATP6V1B2P21281 511 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DRD4P21917 467 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PTGS1P23219 599 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 FPR2P25090 351 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ERP29P30040 261 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CDAP32320 146 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 GDNFP39905 211 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 RPL35P42766 123 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 MAGEA12P43365 314 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CHN2P52757 468 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 HMGCS2P54868 508 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 KCNK10P57789 538 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 UBE2KP61086 200 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 RPL11P62913 178 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 FAM3AP98173 230 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 MYBPC1Q00872 1141 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PUDPQ08623 228 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DBPQ10586 325 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SRSF6Q13247 344 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 GRK1Q15835 563 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 HAGHQ16775 308 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 MST1LQ2TV78 715 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 VPS26BQ4G0F5 336 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 AGKQ53H12 422 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM196Q5HYL7 178 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CRB2Q5IJ48 1285 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SPIN3Q5JUX0 258 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 EEF1DP3Q658K8 133 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ENPP7Q6UWV6 458 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PLXDC2Q6UX71 529 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF836Q6ZNA1 936 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DOK3Q7L591 496 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PIM3Q86V86 326 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CD163Q86VB7 1156 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CBWD2Q8IUF1 395 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 GLB1L2Q8IW92 636 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 APCDD1Q8J025 514 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 OR8J3Q8NGG0 315 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 OR51G2Q8NGK0 314 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 UBASH3BQ8TF42 649 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SPRYD4Q8WW59 207 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 KCNJ9Q92806 393 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CREB3L1Q96BA8 519 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 L3HYPDHQ96EM0 354 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 POM121L2Q96KW2 1035 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 RASL10BQ96S79 203 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 STACQ99469 402 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TSNAXQ99598 290 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 MESP1Q9BRJ9 268 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ASPNQ9BXN1 380 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CCDC90BQ9GZT6 254 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 NAT10Q9H0A0 1025 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PIGMQ9H3S5 423 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 WDR41Q9HAD4 459 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM138Q9NPI0 162 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 NANSQ9NR45 359 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CUTCQ9NTM9 273 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 MRTO4Q9UKD2 239 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ICAM5Q9UMF0 924 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 RAPGEF2Q9Y4G8 1499 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ARHGAP31Q2M1Z3 1444 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 KAT6AQ92794 2004 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF532Q9HCE3 1301 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DNMBPQ6XZF7 1577 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 FEZF1A0PJY2 475 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 NPIPB5A8MRT5 1133 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 C17orf100A8MU93 164 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 USP17L23D6RBM5 183 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 G3V3Y1 287 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 H0Y980 276 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 H3BNH8 94 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CLDN34H7C241 214 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DFFAO00273 331 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 MSTNO14793 375 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms