RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 FBXO48Q5FWF7 155 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 ZNF311Q5JNZ3 666 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 HP1BP3Q5SSJ5 553 aaPredicted RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 CASC10Q5T4H9 136 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 RNASEH2BQ5TBB1 312 aaKnown RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 DMRTA1Q5VZB9 504 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 FAM219BQ5XKK7 198 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 SULT1C3Q6IMI6 304 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 ACSM5Q6NUN0 579 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 FAM111BQ6SJ93 734 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 TMIGD1Q6UXZ0 262 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 SLCO4C1Q6ZQN7 724 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 Q6ZT83 130 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 C3orf62Q6ZUJ4 267 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 RAPH1Q70E73 1250 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 MEPCEQ7L2J0 689 aaKnown RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 CARM1Q86X55 608 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 TDRPQ86YL5 185 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 KLHL7Q8IXQ5 586 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 GBP7Q8N8V2 638 aaPredicted RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 NAT8LQ8N9F0 302 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 NOA1Q8NC60 698 aaKnown RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 OR56A3Q8NH54 315 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 STAG3L4Q8TBR4 150 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 FAM110BQ8TC76 370 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 ABHD3Q8WU67 409 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 KCNC2Q96PR1 638 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 NAPGQ99747 312 aaPredicted RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 PELOQ9BRX2 385 aaKnown RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 RAB17Q9H0T7 212 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 RPF2Q9H7B2 306 aaKnown RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 WDR41Q9HAD4 459 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 NMRAL1Q9HBL8 299 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 POPDC3Q9HBV1 291 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 GP6Q9HCN6 339 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 PRDM7Q9NQW5 492 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 NMRK1Q9NWW6 199 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 MS4A12Q9NXJ0 267 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 PAQR5Q9NXK6 330 aaPredicted RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 AHSPQ9NZD4 102 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 CD274Q9NZQ7 290 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 ZNF69Q9UC07 566 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 NKX1-2Q9UD57 310 aaPredicted RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 PRSS50Q9UI38 385 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 FBXO9Q9UK97 447 aaPredicted RBP4.67□□□□□ -1.66
SEC13-219ENST00000492602 TRAF6Q9Y4K3 522 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 RNF114Q9Y508 228 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 AP4B1Q9Y6B7 739 aa4.67□□□□□ -1.66
SEC13-219ENST00000492602 CIB4A0PJX0 185 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 FAM187AA6NFU0 413 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 WASHC1A8K0Z3 465 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 SHISA8B8ZZ34 492 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 RTCAO00442 366 aaKnown RBP4.66□□□□□ -1.66
SEC13-219ENST00000492602 TNFSF11O14788 317 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 EIF3HO15372 352 aaKnown RBP eCLIP4.66□□□□□ -1.66
SEC13-219ENST00000492602 NDUFB5O43674 189 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PLPP2O43688 288 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PRAMEF4O60810 478 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 GUCY1B2O75343 617 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 REM1O75628 298 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 STK16O75716 305 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PIAS1O75925 651 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 WDR47O94967 919 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PGM3O95394 542 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 IL33O95760 270 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 GPANK1O95872 356 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 TBX6O95947 436 aaPredicted RBP4.66□□□□□ -1.66
SEC13-219ENST00000492602 FSHBP01225 129 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PABPC4LP0CB38 370 aaKnown RBP4.66□□□□□ -1.66
SEC13-219ENST00000492602 SNRPBP14678 240 aaKnown RBP4.66□□□□□ -1.66
SEC13-219ENST00000492602 GPX3P22352 226 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 IGHV1-2P23083 117 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PTX3P26022 381 aaPredicted RBP4.66□□□□□ -1.66
SEC13-219ENST00000492602 CASQ1P31415 396 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PHBP35232 272 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 ARL1P40616 181 aaPredicted RBP4.66□□□□□ -1.66
SEC13-219ENST00000492602 PIK3CGP48736 1102 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 RAP1GDS1P52306 607 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 HNRNPH2P55795 449 aaKnown RBP4.66□□□□□ -1.66
SEC13-219ENST00000492602 IRF8Q02556 426 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PDIA2Q13087 525 aaKnown RBP4.66□□□□□ -1.66
SEC13-219ENST00000492602 ZNF460Q14592 562 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 FAM83EQ2M2I3 478 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 ADPRMQ3LIE5 342 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 MSS51Q4VC12 460 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 DMRTC1Q5HYR2 192 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 TEDDM1Q5T9Z0 273 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 GRTP1Q5TC63 336 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 LGSNQ5TDP6 509 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 PRAMEF9Q5VWM5 478 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 VHLLQ6RSH7 139 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 CYS1Q717R9 158 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 IGDCC3Q8IVU1 814 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 CNTN4Q8IWV2 1026 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 CTAGE3PQ8IX95 158 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 ZBED8Q8IZ13 594 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 SLC35F6Q8N357 371 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 ZNF615Q8N8J6 731 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 ACOT4Q8N9L9 421 aa4.66□□□□□ -1.66
SEC13-219ENST00000492602 C17orf47Q8NEP4 570 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms