RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 PLAURQ03405 335 aa19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 CHRNB3Q05901 458 aa19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 IFI44LQ53G44 452 aa19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 LINC00696Q6ZRV3 163 aa19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 FDCSPQ8NFU4 85 aa19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 RNF138Q8WVD3 245 aa19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 GEMIN6Q8WXD5 167 aaKnown RBP19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 RTN4RQ9BZR6 473 aa19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 ZNF552Q9H707 407 aaPredicted RBP19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 SLC13A4Q9UKG4 626 aa19.93■□□□□ 0.78
VCPKMT-204ENST00000491402 A0A1W2PQD3 144 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 BCAS1O75363 584 aaPredicted RBP19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 RAP2AP10114 183 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 CYB561P49447 251 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 HLCSP50747 726 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 CD226Q15762 336 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 FNDC7Q5VTL7 733 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 ZFP1Q6P2D0 407 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 ISLR2Q6UXK2 745 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 GPALPP1Q8IXQ4 340 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 CMIPQ8IY22 773 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 CYP4Z2PQ8N1L4 340 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 GATSQ8NAP1 163 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 SGCZQ96LD1 299 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 ARMC7Q9H6L4 198 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 KLHL28Q9NXS3 571 aa19.92■□□□□ 0.78
VCPKMT-204ENST00000491402 ATMQ13315 3056 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 PRAMEF25A6NGN4 478 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 FKBP6O75344 327 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 KRT36O76013 467 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 ADH7P40394 386 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 TBCELQ5QJ74 424 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 BICRALQ6AI39 1079 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 PAPD5Q8NDF8 572 aaKnown RBP19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 SECISBP2Q96T21 854 aaKnown RBP19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 WFDC6Q9BQY6 131 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 S100A14Q9HCY8 104 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 SH2D2AQ9NP31 389 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 IL1RAPQ9NPH3 570 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 SLC35A3Q9Y2D2 325 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 SLC9A8Q9Y2E8 581 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 AP4S1Q9Y587 144 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 HEATR5AQ86XA9 2040 aa19.91■□□□□ 0.78
VCPKMT-204ENST00000491402 M0R3H8 397 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 SCO2O43819 266 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 CEACAM4O75871 244 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 F10P00742 488 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 CSTAP01040 98 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 MT-ND1P03886 318 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 VLDLRP98155 873 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 OC90Q02509 493 aaPredicted RBP19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 KCNC4Q03721 635 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 NRF1Q16656 503 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 RTL4Q6ZR62 310 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 MARCH3Q86UD3 253 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 GRAMD2AQ8IUY3 354 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 OR4D11Q8NGI4 311 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 PHOSPHO1Q8TCT1 267 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 PAQR8Q8TEZ7 354 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 UTP23Q9BRU9 249 aaKnown RBP19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 METTL7AQ9H8H3 244 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 ARMC1Q9NVT9 282 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 KLRF1Q9NZS2 232 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 H3BNH8 94 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 H3BNX3 289 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 ADAM10O14672 748 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 FRS3O43559 492 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 NDUFB5O43674 189 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 ANGPTL1O95841 491 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 WDPCPO95876 746 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 ITGB2P05107 769 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 UBTFL6P0CB48 400 aaPredicted RBP19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 HOXB6P17509 224 aaKnown RBP19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 CD96P40200 585 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 CASRP41180 1078 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 MAGEA2P43356 314 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 MFAP5Q13361 173 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 TUBA3CQ13748 450 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 ZSWIM7Q19AV6 140 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 AAGABQ6PD74 315 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 TUBA3EQ6PEY2 450 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 CARM1Q86X55 608 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 LACC1Q8IV20 430 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 VANGL1Q8TAA9 524 aaPredicted RBP19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 CNOT9Q92600 299 aaKnown RBP19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 C7orf34Q96L11 122 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 ARHGDIGQ99819 225 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 CHID1Q9BWS9 393 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 GALNT9Q9HCQ5 603 aa19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 DNAJB12Q9NXW2 375 aaKnown RBP19.9■□□□□ 0.78
VCPKMT-204ENST00000491402 MGRN1O60291 552 aa19.89■□□□□ 0.77
VCPKMT-204ENST00000491402 CCL3P10147 92 aa19.89■□□□□ 0.77
VCPKMT-204ENST00000491402 UBL4AP11441 157 aa19.89■□□□□ 0.77
VCPKMT-204ENST00000491402 CASP3P42574 277 aa19.89■□□□□ 0.77
VCPKMT-204ENST00000491402 CLK3P49761 638 aaKnown RBP19.89■□□□□ 0.77
VCPKMT-204ENST00000491402 RPP38P78345 283 aaKnown RBP19.89■□□□□ 0.77
VCPKMT-204ENST00000491402 NDUFAF6Q330K2 333 aa19.89■□□□□ 0.77
VCPKMT-204ENST00000491402 TMEM81Q6P7N7 255 aa19.89■□□□□ 0.77
VCPKMT-204ENST00000491402 MDGA2Q7Z553 956 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms