RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 HHATQ5VTY9 493 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 OR4F3Q6IEY1 312 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 CLECL1Q8IZS7 167 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 NRGNQ92686 78 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 POLDIP3Q9BY77 421 aaKnown RBP28.26■■■□□ 2.11
LDB1-204ENST00000490751 NUF2Q9BZD4 464 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 GALNT8Q9NY28 637 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 KCNE3Q9Y6H6 103 aa28.26■■■□□ 2.11
LDB1-204ENST00000490751 A6NNC1 897 aa28.25■■■□□ 2.11
LDB1-204ENST00000490751 RPS3AP61247 264 aaKnown RBP28.25■■■□□ 2.11
LDB1-204ENST00000490751 BST1Q10588 318 aa28.25■■■□□ 2.11
LDB1-204ENST00000490751 LINC01560Q8TB33 94 aa28.25■■■□□ 2.11
LDB1-204ENST00000490751 ZNF845Q96IR2 970 aaPredicted RBP28.25■■■□□ 2.11
LDB1-204ENST00000490751 DPY30Q9C005 99 aa28.25■■■□□ 2.11
LDB1-204ENST00000490751 RASSF1Q9NS23 344 aa28.25■■■□□ 2.11
LDB1-204ENST00000490751 PNPOQ9NVS9 261 aa28.25■■■□□ 2.11
LDB1-204ENST00000490751 MPDZO75970 2070 aa28.25■■■□□ 2.11
LDB1-204ENST00000490751 SPG11Q96JI7 2443 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 NPIPA5A0A0B4J1W7 369 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 NPIPA7E9PJI5 369 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 CRHP06850 196 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 NPIPA8P0DM63 369 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 GGNQ86UU5 652 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 METTL25Q8N6Q8 603 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 FNDC9Q8TBE3 224 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 ACTRT2Q8TDY3 377 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 OR7D2Q96RA2 312 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 NPAS1Q99742 590 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 CLEC4MQ9H2X3 399 aaPredicted RBP28.24■■■□□ 2.11
LDB1-204ENST00000490751 MED17Q9NVC6 651 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 ZNF175Q9Y473 711 aa28.24■■■□□ 2.11
LDB1-204ENST00000490751 FAM221AA4D161 298 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 SOX30O94993 753 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 ZNF41P51814 821 aaPredicted RBP28.23■■■□□ 2.11
LDB1-204ENST00000490751 PON3Q15166 354 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 PLPPR5Q32ZL2 321 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 BHLHB9Q6PI77 547 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 GTPBP8Q8N3Z3 284 aaPredicted RBP28.23■■■□□ 2.11
LDB1-204ENST00000490751 CNEP1R1Q8N9A8 125 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 OR5D16Q8NGK9 328 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 B4GALNT2Q8NHY0 566 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 ZBTB8AQ96BR9 441 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 KLHDC3Q9BQ90 382 aa28.23■■■□□ 2.11
LDB1-204ENST00000490751 TMEM120BA0PK00 339 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 A8MXE2 369 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 EPXP11678 715 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 LBPP18428 481 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 WDR4P57081 412 aaKnown RBP28.22■■■□□ 2.11
LDB1-204ENST00000490751 RPS26P62854 115 aaKnown RBP28.22■■■□□ 2.11
LDB1-204ENST00000490751 VWA1Q6PCB0 445 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 ZNF527Q8NB42 609 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 OR8J2Q8NGG1 315 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 PHOSPHO1Q8TCT1 267 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 HOXD1Q9GZZ0 328 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 STOML1Q9UBI4 398 aa28.22■■■□□ 2.11
LDB1-204ENST00000490751 RNF103-CHMP3A0A140T963 221 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 C7orf72A4D263 438 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 RNASET2O00584 256 aaKnown RBP28.21■■■□□ 2.11
LDB1-204ENST00000490751 EIF1AYO14602 144 aaKnown RBP28.21■■■□□ 2.11
LDB1-204ENST00000490751 SMNDC1O75940 238 aaKnown RBP eCLIP28.21■■■□□ 2.11
LDB1-204ENST00000490751 DNAJA1P31689 397 aaKnown RBP28.21■■■□□ 2.11
LDB1-204ENST00000490751 CPOXP36551 454 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 RNF144AP50876 292 aaPredicted RBP28.21■■■□□ 2.11
LDB1-204ENST00000490751 SIRPAP78324 504 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 OCRLQ01968 901 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 ZNF117Q03924 483 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 DAZAP2Q15038 168 aaPredicted RBP28.21■■■□□ 2.11
LDB1-204ENST00000490751 TESK1Q15569 626 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 SGCBQ16585 318 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 C6orf120Q7Z4R8 191 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 MTERF4Q7Z6M4 381 aaKnown RBP28.21■■■□□ 2.11
LDB1-204ENST00000490751 LRRC34Q8IZ02 419 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 CLEC4FQ8N1N0 589 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 STARD4Q96DR4 205 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 RNF145Q96MT1 663 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 SERHL2Q9H4I8 314 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 RNF122Q9H9V4 155 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 MEAF6Q9HAF1 191 aa28.21■■■□□ 2.11
LDB1-204ENST00000490751 MSTNO14793 375 aa28.2■■■□□ 2.1
LDB1-204ENST00000490751 PSMA4P25789 261 aaKnown RBP28.2■■■□□ 2.1
LDB1-204ENST00000490751 EIF1AXP47813 144 aaKnown RBP28.2■■■□□ 2.1
LDB1-204ENST00000490751 KLHL26Q53HC5 615 aa28.2■■■□□ 2.1
LDB1-204ENST00000490751 WDR75Q8IWA0 830 aaKnown RBP28.2■■■□□ 2.1
LDB1-204ENST00000490751 OR4A15Q8NGL6 344 aa28.2■■■□□ 2.1
LDB1-204ENST00000490751 MGARPQ8TDB4 240 aa28.2■■■□□ 2.1
LDB1-204ENST00000490751 SLC35G5Q96KT7 338 aa28.2■■■□□ 2.1
LDB1-204ENST00000490751 PCDHGB4Q9UN71 923 aa28.2■■■□□ 2.1
LDB1-204ENST00000490751 ANKRD28O15084 1053 aa28.19■■■□□ 2.1
LDB1-204ENST00000490751 MATN1P21941 496 aa28.19■■■□□ 2.1
LDB1-204ENST00000490751 KIR2DL2P43627 348 aaPredicted RBP28.19■■■□□ 2.1
LDB1-204ENST00000490751 ATP12AP54707 1039 aa28.19■■■□□ 2.1
LDB1-204ENST00000490751 DDX59Q5T1V6 619 aaKnown RBP eCLIP28.19■■■□□ 2.1
LDB1-204ENST00000490751 BTLAQ7Z6A9 289 aa28.19■■■□□ 2.1
LDB1-204ENST00000490751 ANKRD46Q86W74 232 aa28.19■■■□□ 2.1
LDB1-204ENST00000490751 POC1BQ8TC44 478 aa28.19■■■□□ 2.1
LDB1-204ENST00000490751 TESCQ96BS2 214 aa28.19■■■□□ 2.1
LDB1-204ENST00000490751 NPIPB9F8W1W9 429 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 H3BNH8 94 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 OIP5O43482 229 aa28.18■■■□□ 2.1
LDB1-204ENST00000490751 SCN2BO60939 215 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms