RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 CT55Q8WUE5 264 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 SLC13A3Q8WWT9 602 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 SLC5A11Q8WWX8 675 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 EXT2Q93063 718 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 ABTB1Q969K4 478 aaPredicted RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 KIAA1191Q96A73 305 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 PTERQ96BW5 349 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 C12orf43Q96C57 262 aaKnown RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 C19orf60Q96EN9 201 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 MMABQ96EY8 250 aaPredicted RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 FER1L6-AS2Q96M78 137 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 PRAP1Q96NZ9 151 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 OLFM1Q99784 485 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 DPCDQ9BVM2 203 aaPredicted RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 NPLQ9BXD5 320 aaPredicted RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 ERVK-6Q9BXR3 956 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 MS4A7Q9GZW8 240 aaPredicted RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 SPRTNQ9H040 489 aaPredicted RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 CHST8Q9H2A9 424 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 ADNPQ9H2P0 1102 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 ACTL8Q9H568 366 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 PRORYQ9H606 182 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 ALG9Q9H6U8 611 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 RPF2Q9H7B2 306 aaKnown RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 WDR54Q9H977 334 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 PELI2Q9HAT8 420 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 ANKHQ9HCJ1 492 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF304Q9HCX3 659 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 FAM60AQ9NP50 221 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 DNAJC11Q9NVH1 559 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 C14orf105Q9NVL8 296 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 TMEM45AQ9NWC5 275 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 RHBDL2Q9NX52 303 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 NUDT4Q9NZJ9 180 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 OPTCQ9UBM4 332 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 ZNF282Q9UDV7 671 aaPredicted RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 NDRG4Q9ULP0 352 aaKnown RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 KLHL20Q9Y2M5 609 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 SH3GLB1Q9Y371 365 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 FIS1Q9Y3D6 152 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 PTRH2Q9Y3E5 179 aaKnown RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 HEMK1Q9Y5R4 338 aaPredicted RBP4.38□□□□□ -1.71
CSTF1-205ENST00000490539 SPACA6W5XKT8 324 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 MGAQ8IWI9 3026 aa4.38□□□□□ -1.71
CSTF1-205ENST00000490539 PDZD2O15018 2839 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 RNF103-CHMP3A0A140T963 221 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 LOC101059948A0A1B0GTJ6 334 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 A0A1W2PPV9 198 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 TRBC2A0A5B9 178 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 SYNDIG1LA6NDD5 238 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 VWC2LB2RUY7 222 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 H0YAE9 185 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 H0YGG7 62 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 H0YIG0 161 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 H3BMQ9 156 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 FXYD1O00168 92 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 CDC7O00311 574 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 NR5A2O00482 541 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 UBFD1O14562 309 aaKnown RBP4.37□□□□□ -1.71
CSTF1-205ENST00000490539 AZIN1O14977 448 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 ANGPT2O15123 496 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 ARPC2O15144 300 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 ACOX3O15254 700 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 CLOCKO15516 846 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 NDUFS4O43181 175 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 NOL3O60936 208 aaKnown RBP4.37□□□□□ -1.71
CSTF1-205ENST00000490539 SUPT7LO94864 414 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 TSPAN12O95859 305 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 LDLRP01130 860 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 NPPAP01160 153 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 HEXBP07686 556 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 CYC1P08574 325 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 GNAO1P09471 354 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 PRR35P0CG20 571 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 CDH1P12830 882 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 ICAM2P13598 275 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 IDO1P14902 403 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 CD1DP15813 335 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 NPPBP16860 134 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 LBPP18428 481 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 CAPN3P20807 821 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 JAK1P23458 1154 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 HTR1EP28566 365 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 PEBP1P30086 187 aaKnown RBP4.37□□□□□ -1.71
CSTF1-205ENST00000490539 PRKAR1BP31321 381 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 OTX2P32243 289 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 AHRP35869 848 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 STT3AP46977 705 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 ENTPD1P49961 510 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 HLCSP50747 726 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 TMBIM6P55061 237 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 EEFSECP57772 596 aaKnown RBP4.37□□□□□ -1.71
CSTF1-205ENST00000490539 C21orf58P58505 322 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 ARF3P61204 181 aaPredicted RBP4.37□□□□□ -1.71
CSTF1-205ENST00000490539 ADARB1P78563 741 aaKnown RBP4.37□□□□□ -1.71
CSTF1-205ENST00000490539 IRF8Q02556 426 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 CDC20Q12834 499 aa4.37□□□□□ -1.71
CSTF1-205ENST00000490539 CNN3Q15417 329 aaKnown RBP4.37□□□□□ -1.71
CSTF1-205ENST00000490539 ZIC1Q15915 447 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms