RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PIGQQ9BRB3 760 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 SLC39A3Q9BRY0 314 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 DUSP26Q9BV47 211 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 DPY30Q9C005 99 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 FANCFQ9NPI8 374 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 ACSS1Q9NUB1 689 aaPredicted RBP9.38□□□□□ -0.91
TTC28-207ENST00000490475 DDX18Q9NVP1 670 aaKnown RBP9.38□□□□□ -0.91
TTC28-207ENST00000490475 BEX4Q9NWD9 120 aaPredicted RBP9.38□□□□□ -0.91
TTC28-207ENST00000490475 PAQR5Q9NXK6 330 aaPredicted RBP9.38□□□□□ -0.91
TTC28-207ENST00000490475 CLCF1Q9UBD9 225 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 PLEKHA6Q9Y2H5 1048 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 USH1CQ9Y6N9 552 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 ACANP16112 2415 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 ZFHX3Q15911 3703 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 FLNAP21333 2647 aaKnown RBP9.37□□□□□ -0.91
TTC28-207ENST00000490475 NF1P21359 2839 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 NIPBLQ6KC79 2804 aaeCLIP9.37□□□□□ -0.91
TTC28-207ENST00000490475 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 A8MXE2 369 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 C9JVG2 144 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 ARHGEF9O43307 516 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 DIAPH2O60879 1101 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 TNFRSF21O75509 655 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 PSMG1O95456 288 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 C6orf47O95873 294 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 FCGR2AP12318 317 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 EVI2BP34910 448 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 WNT3P56703 355 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 CLDN18P56856 261 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 C21orf58P58505 322 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 RPS3AP61247 264 aaKnown RBP9.37□□□□□ -0.91
TTC28-207ENST00000490475 PHC1P78364 1004 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 PSG6Q00889 435 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 ZNF155Q12901 538 aaPredicted RBP9.37□□□□□ -0.91
TTC28-207ENST00000490475 SNTB1Q13884 538 aaKnown RBP9.37□□□□□ -0.91
TTC28-207ENST00000490475 SHEQ5VZ18 495 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 OR4F3Q6IEY1 312 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 OGFOD2Q6N063 350 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 SPATA19Q7Z5L4 167 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 PIGWQ7Z7B1 504 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 CPLX4Q7Z7G2 160 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 LRRC34Q8IZ02 419 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 CCDC197Q8NCU1 140 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 NUP43Q8NFH3 380 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 ZFP28Q8NHY6 868 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 ACTRT2Q8TDY3 377 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 OR5P2Q8WZ92 322 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 NRGNQ92686 78 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 C16orf58Q96GQ5 468 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 MAELQ96JY0 434 aaKnown RBP9.37□□□□□ -0.91
TTC28-207ENST00000490475 MARK4Q96L34 752 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 MAGEB18Q96M61 343 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 BHLHE41Q9C0J9 482 aaPredicted RBP9.37□□□□□ -0.91
TTC28-207ENST00000490475 CXorf36Q9H7Y0 433 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 EQTNQ9NQ60 294 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 SIRT3Q9NTG7 399 aaPredicted RBP9.37□□□□□ -0.91
TTC28-207ENST00000490475 ATAD3AQ9NVI7 634 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 FAM120CQ9NX05 1096 aaKnown RBP9.37□□□□□ -0.91
TTC28-207ENST00000490475 GALNT8Q9NY28 637 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 ELOVL5Q9NYP7 299 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 ZNF175Q9Y473 711 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 SNX8Q9Y5X2 465 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 GPR45Q9Y5Y3 372 aa9.37□□□□□ -0.91
TTC28-207ENST00000490475 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 SLC22A20A6NK97 555 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 CFLARO15519 480 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 EMC8O43402 210 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 SCN2BO60939 215 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 SOX30O94993 753 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 KCNH1O95259 989 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 ATE1O95260 518 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 DRD4P21917 467 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 IL12AP29459 219 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 LCN1P31025 176 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 GABRA3P34903 492 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 IDH3AP50213 366 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 MNAT1P51948 309 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 AGFG1P52594 562 aaKnown RBP9.36□□□□□ -0.91
TTC28-207ENST00000490475 AQP5P55064 265 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 C17orf67Q0P5P2 114 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 MLC1Q15049 377 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 LSM12Q3MHD2 195 aaKnown RBP9.36□□□□□ -0.91
TTC28-207ENST00000490475 RAET1LQ5VY80 246 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 SZRD1Q7Z422 152 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 LUZP2Q86TE4 346 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 CLECL1Q8IZS7 167 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 CLEC4FQ8N1N0 589 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 FADS6Q8N9I5 356 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 CEP70Q8NHQ1 597 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 LINC01560Q8TB33 94 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 PIGTQ969N2 578 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 FAM120BQ96EK7 910 aaKnown RBP9.36□□□□□ -0.91
TTC28-207ENST00000490475 GIMAP5Q96F15 307 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 THOC1Q96FV9 657 aaKnown RBP9.36□□□□□ -0.91
TTC28-207ENST00000490475 ZNF317Q96PQ6 595 aaPredicted RBP9.36□□□□□ -0.91
TTC28-207ENST00000490475 PIP5K1AQ99755 562 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 EBF4Q9BQW3 602 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 PLEKHF2Q9H8W4 249 aa9.36□□□□□ -0.91
TTC28-207ENST00000490475 AIG1Q9NVV5 245 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms