RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 CEP19Q96LK0 163 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PRRC1Q96M27 445 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SLC38A2Q96QD8 506 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NIPSNAP1Q9BPW8 284 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TREX2Q9BQ50 279 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MENTQ9BUN1 341 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MND1Q9BWT6 205 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 LGR4Q9BXB1 951 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SLIRPQ9GZT3 109 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NUAK2Q9H093 628 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 OR51I1Q9H343 314 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 DSN1Q9H410 356 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 GLIPR2Q9H4G4 154 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ARMC7Q9H6L4 198 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MTHFD2LQ9H903 347 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ASCL3Q9NQ33 180 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PRDM7Q9NQW5 492 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SIRT3Q9NTG7 399 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 IMP3Q9NV31 184 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MED17Q9NVC6 651 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MRPS18AQ9NVS2 196 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RLIMQ9NVW2 624 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RHBDL2Q9NX52 303 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 FBXL12Q9NXK8 326 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 GPR83Q9NYM4 423 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NLGN3Q9NZ94 848 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 REV1Q9UBZ9 1251 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PHF11Q9UIL8 331 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ACSL6Q9UKU0 697 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PLAGL1Q9UM63 463 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SSR3Q9UNL2 185 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ASB4Q9Y574 426 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SPACA6W5XKT8 324 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TMEM131Q92545 1883 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MN1Q10571 1320 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NINQ8N4C6 2090 aa4.71□□□□□ -1.65
PTPRK-213ENST00000490332 HEATR5BQ9P2D3 2071 aa4.71□□□□□ -1.65
PTPRK-213ENST00000490332 TBC1D3DA0A087WVF3 549 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TBC1D3IA0A087WXS9 549 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TBC1D3EA0A087X179 549 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TRBV4-1A0A0J9YWV2 114 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 A0A1W2PP55 124 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 A0A1W2PQU0 124 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 FEZF1A0PJY2 475 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 OTOL1A6NHN0 477 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 OR5K4A6NMS3 321 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 POM121CA8CG34 1229 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 ISM1B1AKI9 464 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TBC1D3LB9A6J9 549 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TMX2-CTNND1H3BSU7 103 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 J3KTA2 159 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 J3QRK9 145 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 RTCAO00442 366 aaKnown RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 AP3D1O14617 1153 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 FFAR1O14842 300 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 ERI3O43414 337 aaKnown RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 PROM1O43490 865 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TMPRSS11DO60235 418 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 ENTPD6O75354 484 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 NME6O75414 186 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 ERAL1O75616 437 aaKnown RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 UPK1BO75841 260 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 CYP7B1O75881 506 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 RAB36O95755 333 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 CLDN1O95832 211 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 PTTG1O95997 202 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 MT-CO3P00414 261 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 AK1P00568 194 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TBC1D3HP0C7X1 549 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 ADORA3P0DMS8 318 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 GAAP10253 952 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 NR2F6P10588 404 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 DBTP11182 482 aaKnown RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 IMPDH2P12268 514 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 ACP5P13686 325 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 POU2F1P14859 743 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 MYL12AP19105 171 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TNFRSF1BP20333 461 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 ENDOUP21128 410 aaKnown RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 NR4A1P22736 598 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 GADD45AP24522 165 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 PRKAR1BP31321 381 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 IDUAP35475 653 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 BUD31P41223 144 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 CAPZA2P47755 286 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 PCYT1AP49585 367 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 RORCP51449 518 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 DUSP3P51452 185 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 PSMD7P51665 324 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 MLLT10P55197 1068 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 CASP9P55211 416 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 LIM2P55344 173 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 LSM3P62310 102 aaKnown RBP4.71□□□□□ -1.66
PTPRK-213ENST00000490332 YPEL5P62699 121 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 CYP4F2P78329 520 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 CDK5Q00535 292 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 RAB40BQ12829 278 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 TSPAN31Q12999 210 aa4.71□□□□□ -1.66
PTPRK-213ENST00000490332 MLLT11Q13015 90 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms