RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 PTGFRNQ9P2B2 879 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 TNFRSF10DQ9UBN6 386 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 DAPP1Q9UN19 280 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 NDRG2Q9UN36 371 aaKnown RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 B3GALT2O43825 422 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 ZGLP1P0C6A0 271 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 TEAD1P28347 426 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 ETV6P41212 452 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 TNFRSF17Q02223 184 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.61□□□□□ -0.07
BRD9-208ENST00000489816 PGGHGQ32M88 737 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 ARL9Q6T311 187 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 CD300LDQ6UXZ3 194 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 DGAT2L6Q6ZPD8 337 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 TMEM99Q8N816 258 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 SFXN5Q8TD22 340 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 ARHGAP9Q9BRR9 750 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 MTIF3Q9H2K0 278 aaKnown RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 PLSCR3Q9NRY6 295 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 EVA1BQ9NVM1 165 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 WSB2Q9NYS7 404 aaPredicted RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 GSTK1Q9Y2Q3 226 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 N6AMT1Q9Y5N5 214 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 ACVR1BP36896 505 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 SLC3A1Q07837 685 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 ZNF155Q12901 538 aaPredicted RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 TBRG1Q3YBR2 411 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 ATAD3CQ5T2N8 411 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 PPP2R2DQ66LE6 453 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 ZNF620Q6ZNG0 422 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 CXXC5Q7LFL8 322 aaKnown RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 RAB43Q86YS6 212 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 OR2T33Q8NG76 320 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 GAL3ST3Q96A11 431 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 RIPOR3Q96MK2 946 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 MS4A4EQ96PG1 132 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 GAS2L1Q99501 681 aaPredicted RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 MTHFD2LQ9H903 347 aaPredicted RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 HRASLS2Q9NWW9 162 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 CBLCQ9ULV8 474 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 MEIOCA2RUB1 952 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 E9PI62 339 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 GABRPO00591 440 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 NDUFV2P19404 249 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 PAICSP22234 425 aaKnown RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 ZNF136P52737 540 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 IFITM2Q01629 132 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 NDUFAF6Q330K2 333 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 IDNKQ5T6J7 187 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 AADACL4Q5VUY2 407 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 HMGB4Q8WW32 186 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 GFM1Q96RP9 751 aaKnown RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 CCDC32Q9BV29 185 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 IFT27Q9BW83 186 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 C1QTNF7Q9BXJ2 289 aa14.61□□□□□ -0.07
BRD9-208ENST00000489816 PPIL3Q9H2H8 161 aaKnown RBP14.61□□□□□ -0.07
BRD9-208ENST00000489816 GPR89AB7ZAQ6 455 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 HRKO00198 91 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 GMFGO60234 142 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 RFPL3O75679 317 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 GPR89BP0CG08 455 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 ENDOUP21128 410 aaKnown RBP14.6□□□□□ -0.07
BRD9-208ENST00000489816 FXYD6P3P58550 94 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 SCN1BQ07699 218 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 FCRL6Q6DN72 434 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 ARL14Q8N4G2 192 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 DEFB119Q8N690 84 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 OSTF1Q92882 214 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 TMCO6Q96DC7 493 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 MRGPRX1Q96LB2 322 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 IL20Q9NYY1 176 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 ACTR10Q9NZ32 417 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 NLGN3Q9NZ94 848 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 SNTNA6NMZ2 147 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 PSKH1P11801 424 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 TLX1P31314 330 aaPredicted RBP14.6□□□□□ -0.07
BRD9-208ENST00000489816 RPS15AP62244 130 aaKnown RBP14.6□□□□□ -0.07
BRD9-208ENST00000489816 SUZ12Q15022 739 aaKnown RBP14.6□□□□□ -0.07
BRD9-208ENST00000489816 OR1Q1Q15612 314 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 TMEM92Q6UXU6 159 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 GDPGP1Q6ZNW5 385 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 MBOAT2Q6ZWT7 520 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 PARGQ86W56 976 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 SENP5Q96HI0 755 aaPredicted RBP14.6□□□□□ -0.07
BRD9-208ENST00000489816 RANGRFQ9HD47 186 aaPredicted RBP14.6□□□□□ -0.07
BRD9-208ENST00000489816 KLHL1Q9NR64 748 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 ZNF221Q9UK13 617 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 GRIP1Q9Y3R0 1128 aa14.6□□□□□ -0.07
BRD9-208ENST00000489816 FAM25AB3EWG3 89 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 FAM25CB3EWG5 89 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 FAM25GB3EWG6 89 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 ADAM11O75078 769 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 RDH16O75452 317 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 IL1AP01583 271 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 BMP7P18075 431 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 DCST2Q5T1A1 773 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 UBQLNLQ8IYU4 475 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 CADM2Q8N3J6 435 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 OR13C5Q8NGS8 318 aa14.59□□□□□ -0.07
BRD9-208ENST00000489816 OR6F1Q8NGZ6 308 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms