RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 C3P1Q6ZMU1 363 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 TRILQ7L0X0 811 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 SERPINA11Q86U17 422 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 OR5M3Q8NGP4 307 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 SPPL2AQ8TCT8 520 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 DIO2Q92813 273 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 RAB8BQ92930 207 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 MAL2Q969L2 176 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 MARVELD3Q96A59 401 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 HSPBAP1Q96EW2 488 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 RSRC1Q96IZ7 334 aaKnown RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF597Q96LX8 424 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 BTBD9Q96Q07 612 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 OR7D2Q96RA2 312 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 THUMPD3Q9BV44 507 aaKnown RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 ACTRT3Q9BYD9 372 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 ALG2Q9H553 416 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 PIF1Q9H611 641 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 LDAHQ9H6V9 325 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNF703Q9H7S9 590 aaPredicted RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 PROK2Q9HC23 129 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 EQTNQ9NQ60 294 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 COQ3Q9NZJ6 369 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 ADA2Q9NZK5 511 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 PRODH2Q9UF12 536 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 POMPQ9Y244 141 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 GPR55Q9Y2T6 319 aaPredicted RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 NOTCH2Q04721 2471 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 EXPH5Q8NEV8 1989 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 TRGV5A0A0B4J1U4 118 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 GXYLT2A0PJZ3 443 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 LRRC3CA6NJW4 275 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 FIGNL2A6NMB9 653 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 EVPLLA8MZ36 301 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 ACOT8O14734 319 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 COQ9O75208 318 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 TRIM3O75382 744 aaPredicted RBP9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 TFPTP0C1Z6 253 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 OR12D1P0DN82 309 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 ABCD3P28288 659 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 GRNP28799 593 aaKnown RBP9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 MSX2P35548 267 aaPredicted RBP9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 CRATP43155 626 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 MAGEA8P43361 318 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 PPICP45877 212 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 KHKP50053 298 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 FBXW4P57775 412 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 DSTNP60981 165 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 PSPHP78330 225 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 MS4A2Q01362 244 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 BNIP2Q12982 314 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 RCN1Q15293 331 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 GXYLT1Q4G148 440 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 EMC4Q5J8M3 183 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 AP1ARQ63HQ0 302 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 ZCCHC12Q6PEW1 402 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 NCCRP1Q6ZVX7 275 aaPredicted RBP9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 OLIG3Q7RTU3 272 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 SZRD1Q7Z422 152 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 CDRT4Q8N9R6 151 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 FAM110BQ8TC76 370 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 CA5BP1Q8WTZ4 195 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 ASB5Q8WWX0 329 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 CDS1Q92903 461 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 SDCCAG3Q96C92 435 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 ASB9Q96DX5 294 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 REXO5Q96IC2 774 aaKnown RBP9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 LCORQ96JN0 433 aaPredicted RBP9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 JSRP1Q96MG2 331 aaPredicted RBP9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 STACQ99469 402 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 SH3GL1Q99961 368 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 ANGPTL4Q9BY76 406 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 NXF5Q9H1B4 397 aaKnown RBP9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 PIGUQ9H490 435 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 TMEM38AQ9H6F2 299 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 EXO5Q9H790 373 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 S100A14Q9HCY8 104 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 ACKR4Q9NPB9 350 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 A4GALTQ9NPC4 353 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 DUSP22Q9NRW4 184 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 FBXO34Q9NWN3 711 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 GIN1Q9NXP7 522 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 CORO2BQ9UQ03 480 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 LIPGQ9Y5X9 500 aa9.64□□□□□ -0.87
SCAMP4-208ENST00000489554 FRG2CA6NGY1 282 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 TMEM229AB2RXF0 380 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 WDR1O75083 606 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 GMNNO75496 209 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 PPM1BO75688 479 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 IGKV1D-16P01601 117 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 CHRM4P08173 479 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 HOXD4P09016 255 aaPredicted RBP9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 CELA3AP09093 270 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 RFPL3SP0C7P2 107 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 COX6B1P14854 86 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 HOXB6P17509 224 aaKnown RBP9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 DRD5P21918 477 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 ACVR2AP27037 513 aa9.63□□□□□ -0.87
SCAMP4-208ENST00000489554 PTGER4P35408 488 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms