RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NUDT14O95848 222 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 SNRPB2P08579 225 aaKnown RBP12.93□□□□□ -0.34
BRCA1-218ENST00000489037 OR12D1P0DN82 309 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF708P17019 499 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 IL12AP29459 219 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 ADH7P40394 386 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 LHX2P50458 406 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 POLR2JP52435 117 aaKnown RBP12.93□□□□□ -0.34
BRCA1-218ENST00000489037 RPS3AP61247 264 aaKnown RBP12.93□□□□□ -0.34
BRCA1-218ENST00000489037 HPCAP84074 193 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 GPR68Q15743 365 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 ARHGAP11BQ3KRB8 267 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 SAXO2Q658L1 398 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 TNFAIP8L2Q6P589 184 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-218ENST00000489037 P4HA3Q7Z4N8 544 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 UBQLNLQ8IYU4 475 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 CHDHQ8NE62 594 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-218ENST00000489037 MIPOL1Q8TD10 442 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 CKAP2Q8WWK9 683 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 NEURL3Q96EH8 262 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 SH3YL1Q96HL8 342 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-218ENST00000489037 TM9SF2Q99805 663 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 TUBA1CQ9BQE3 449 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 CCDC28BQ9BUN5 200 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 SDR39U1Q9NRG7 319 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-218ENST00000489037 DTNAQ9Y4J8 743 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 HEATR5AQ86XA9 2040 aa12.93□□□□□ -0.34
BRCA1-218ENST00000489037 CENPEQ02224 2701 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 NPIPA5A0A0B4J1W7 369 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 OR2M5A3KFT3 312 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-218ENST00000489037 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-218ENST00000489037 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-218ENST00000489037 CLCA1A8K7I4 914 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 NPIPA7E9PJI5 369 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 H3BML4 177 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 SASH3O75995 380 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 NPIPA8P0DM63 369 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF17P17021 662 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 CEACAM8P31997 349 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-218ENST00000489037 IDH3AP50213 366 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 AQP5P55064 265 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 CASP9P55211 416 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 B3GALT5-AS1P59052 145 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 KLHL26Q53HC5 615 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 HSP90B2PQ58FF3 399 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 MEX3BQ6ZN04 569 aaKnown RBP12.92□□□□□ -0.34
BRCA1-218ENST00000489037 MSANTD1Q6ZTZ1 278 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 GRAMD2AQ8IUY3 354 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 TNIP2Q8NFZ5 429 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 OR5M1Q8NGP8 315 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 MBD3L2Q8NHZ7 208 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-218ENST00000489037 SMPDL3BQ92485 455 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 WNT2BQ93097 391 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 ZBTB8AQ96BR9 441 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 ITCHQ96J02 903 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 ZFP3Q96NJ6 502 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 SPOCK3Q9BQ16 436 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 NMUR2Q9GZQ4 415 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 SLC24A3Q9HC58 644 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 POLE3Q9NRF9 147 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF629Q9UEG4 869 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF337Q9Y3M9 751 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 AP4B1Q9Y6B7 739 aa12.92□□□□□ -0.34
BRCA1-218ENST00000489037 KIAA1549Q9HCM3 1950 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 FAM234BA2RU67 622 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 CYSRT1A8MQ03 144 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 B4DXG7 233 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 C19orf84I3L1E1 186 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 SEC14L5O43304 696 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 TOXO94900 526 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 GSNP06396 782 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 TMIGD3P0DMS9 266 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-218ENST00000489037 BMP5P22003 454 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 ME2P23368 584 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 CTSSP25774 331 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 OPRM1P35372 400 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 EIF1P41567 113 aaKnown RBP12.91□□□□□ -0.34
BRCA1-218ENST00000489037 P2RX1P51575 399 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 SUMO3P55854 103 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-218ENST00000489037 CLDN18P56856 261 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 EEF1A1P68104 462 aaKnown RBP12.91□□□□□ -0.34
BRCA1-218ENST00000489037 IRX1P78414 480 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-218ENST00000489037 SGCBQ16585 318 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 GPAT3Q53EU6 434 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 EEF1A1P5Q5VTE0 462 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 ARSKQ6UWY0 536 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 SEM1Q6ZVN7 128 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 RNF130Q86XS8 419 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 TMCO5AQ8N6Q1 288 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 RAB8BQ92930 207 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 ROPN1LQ96C74 230 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 INPP5KQ9BT40 448 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 SERHL2Q9H4I8 314 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 MKLN1Q9UL63 735 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 LIPT1Q9Y234 373 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 WDR45Q9Y484 360 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 NOTCH2Q04721 2471 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms