RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 RFC2P35250 354 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 SOX6P35712 828 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 OR3A4PP47883 348 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 OR1D4P47884 311 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 STK19P49842 368 aaPredicted RBP2.83□□□□□ -1.96
SSR1-209ENST00000488834 IL24Q13007 206 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 GPM6BQ13491 265 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 RAB35Q15286 201 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 LDLRAP1Q5SW96 308 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 C9orf129Q5T035 196 aaKnown RBP2.83□□□□□ -1.96
SSR1-209ENST00000488834 TPGS2Q68CL5 300 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 RAET1GQ6H3X3 334 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 FAM159AQ6UWV7 190 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 ANGPTL8Q6UXH0 198 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 ADGRD2Q7Z7M1 963 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 AMZ2Q86W34 360 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 ZNF677Q86XU0 584 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 KRT222Q8N1A0 295 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 GPR137CQ8N3F9 429 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 LINC00167Q96N53 147 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 TSSK1BQ9BXA7 367 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 CCSER1Q9C0I3 900 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 OPN3Q9H1Y3 402 aaPredicted RBP2.83□□□□□ -1.96
SSR1-209ENST00000488834 PALMDQ9NP74 551 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 EXOSC3Q9NQT5 275 aaKnown RBP2.83□□□□□ -1.96
SSR1-209ENST00000488834 DCAF13Q9NV06 445 aaKnown RBP2.83□□□□□ -1.96
SSR1-209ENST00000488834 APOBEC3BQ9UH17 382 aaKnown RBP2.83□□□□□ -1.96
SSR1-209ENST00000488834 PRO0461Q9UI25 63 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 PLEKHA6Q9Y2H5 1048 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.83□□□□□ -1.96
SSR1-209ENST00000488834 TNRQ92752 1358 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 CCDC144AA2RUR9 1427 aa2.83□□□□□ -1.96
SSR1-209ENST00000488834 IGLV8-61A0A075B6I0 122 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 LINC00854A0A1B0GVQ3 168 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 SLC17A2O00624 439 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 NUDT21O43809 227 aaKnown RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 MTX2O75431 263 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 SCGB2A1O75556 95 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 SPAG6O75602 509 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 STK17BO94768 372 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 ACTL6AO96019 429 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 IGFBP1P08833 259 aaPredicted RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 TPM1P09493 284 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 PSMB1P20618 241 aaKnown RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 PTBP1P26599 531 aaKnown RBP eCLIP2.82□□□□□ -1.965e-15■□□□□ 9.5
SSR1-209ENST00000488834 CCND2P30279 289 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 PRDX2P32119 198 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 NF2P35240 595 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 TAGLN2P37802 199 aaKnown RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 POU3F4P49335 361 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 SLC26A2P50443 739 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 MTTPP55157 894 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 CAMK4Q16566 473 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 ZNF528Q3MIS6 628 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 ATAD3BQ5T9A4 648 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 HHATQ5VTY9 493 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 TTC19Q6DKK2 380 aaPredicted RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 MOB1BQ7L9L4 216 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 SYVN1Q86TM6 617 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 GPR65Q8IYL9 337 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 MYOCDQ8IZQ8 938 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 C14orf178Q8N769 122 aaPredicted RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 ZNF397Q8NF99 534 aaPredicted RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 CCDC148Q8NFR7 591 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 OR6C4Q8NGE1 309 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 LINC01006Q8NI28 216 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 AGR3Q8TD06 166 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 FAM122AQ96E09 287 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 C11orf24Q96F05 449 aaPredicted RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 TBCDQ9BTW9 1192 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 GCOM2Q9BZD3 368 aaPredicted RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 NMNAT2Q9BZQ4 307 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 GLT8D2Q9H1C3 349 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 CRLF2Q9HC73 371 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 FAM114A2Q9NRY5 505 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 PLSCR3Q9NRY6 295 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.82□□□□□ -1.967e-8■■■□□ 15.1
SSR1-209ENST00000488834 ELOVL2Q9NXB9 296 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 SMPD3Q9NY59 655 aaPredicted RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 CNOT2Q9NZN8 540 aaKnown RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 C6orf203Q9P0P8 240 aaPredicted RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 GHRLQ9UBU3 117 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 IL20RAQ9UHF4 553 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 SNX6Q9UNH7 406 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 U3KQV3 271 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 ZMYM6O95789 1325 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 TTC21BQ7Z4L5 1316 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 DHX57Q6P158 1386 aaKnown RBP2.82□□□□□ -1.96
SSR1-209ENST00000488834 PLEKHG2Q9H7P9 1386 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 ARHGAP31Q2M1Z3 1444 aa2.82□□□□□ -1.96
SSR1-209ENST00000488834 LRRIQ4A6NIV6 560 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 F8VZ95 297 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 F8WDY8 70 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 SMC2O95347 1197 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 PCCBP05166 539 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 ASGR1P07306 291 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 GSTT2P0CG29 244 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 GSTT2BP0CG30 244 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 RRASP10301 218 aa2.81□□□□□ -1.96
SSR1-209ENST00000488834 CYP11B1P15538 503 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms