RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CXCR4P61073 352 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 CDK6Q00534 326 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 CDK5R2Q13319 367 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 NEDD8Q15843 81 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 AGAP7PQ5VUJ5 663 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 RNF130Q86XS8 419 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 SPARTQ8N0X7 666 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 SLC5A8Q8N695 610 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 NFKBIDQ8NI38 313 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 LZICQ8WZA0 190 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 TAMM41Q96BW9 452 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 AGAP4Q96P64 663 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 GAL3ST4Q96RP7 486 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 RIBC2Q9H4K1 309 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 CDCP1Q9H5V8 836 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 ZBTB20Q9HC78 741 aaPredicted RBP17.84■□□□□ 0.45
CCM2-216ENST00000488727 NTMQ9P121 344 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 KIF17Q9P2E2 1029 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 NDRG4Q9ULP0 352 aaKnown RBP17.84■□□□□ 0.45
CCM2-216ENST00000488727 ANGPT4Q9Y264 503 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 K7EM74 188 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 PDGFAP04085 211 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 HTR1AP08908 422 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 AQP1P29972 269 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 SOAT1P35610 550 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 PRIM2P49643 509 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 ST13P50502 369 aaKnown RBP17.84■□□□□ 0.45
CCM2-216ENST00000488727 ACER2Q5QJU3 275 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 SAXO2Q658L1 398 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 SLC29A4Q7RTT9 530 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 GALNT5Q7Z7M9 940 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 RPS19BP1Q86WX3 136 aaKnown RBP17.84■□□□□ 0.45
CCM2-216ENST00000488727 OR5AK3PQ8NH89 298 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 NUBPLQ8TB37 319 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 ADIPOR1Q96A54 375 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 NEURL3Q96EH8 262 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 GIMAP5Q96F15 307 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 ABHD17AQ96GS6 310 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 SMAD5Q99717 465 aaKnown RBP17.84■□□□□ 0.45
CCM2-216ENST00000488727 APOL4Q9BPW4 351 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 ITPAQ9BY32 194 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 GABARAPL3Q9BY60 117 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 KRT84Q9NSB2 600 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 NDUFAF4Q9P032 175 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 MYOTQ9UBF9 498 aa17.84■□□□□ 0.45
CCM2-216ENST00000488727 HEMK1Q9Y5R4 338 aaPredicted RBP17.84■□□□□ 0.45
CCM2-216ENST00000488727 BOD1L1Q8NFC6 3051 aa17.83■□□□□ 0.45
CCM2-216ENST00000488727 KMT2BQ9UMN6 2715 aaPredicted RBP17.83■□□□□ 0.45
CCM2-216ENST00000488727 C2orf92A0A1B0GVN3 265 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 H3BMQ9 156 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 MKRN2OSH3BPM6 223 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 EMC8O43402 210 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 ZNF354AO60765 605 aaPredicted RBP17.83■□□□□ 0.44
CCM2-216ENST00000488727 TMBIM6P55061 237 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 MLF1P58340 268 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 LAPTM4AQ15012 233 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 GTF2IRD2BQ6EKJ0 949 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 TMEM64Q6YI46 380 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 LINC00696Q6ZRV3 163 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 SZRD1Q7Z422 152 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 GTF2IRD2Q86UP8 949 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 ZNF441Q8N8Z8 693 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 COG8Q96MW5 612 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 VSTM2LQ96N03 204 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 ARHGAP9Q9BRR9 750 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 FOLH1BQ9HBA9 442 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 ZCCHC3Q9NUD5 404 aaKnown RBP17.83■□□□□ 0.44
CCM2-216ENST00000488727 PCDHGB1Q9Y5G3 927 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 LYVE1Q9Y5Y7 322 aa17.83■□□□□ 0.44
CCM2-216ENST00000488727 PIEZO2Q9H5I5 2752 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 A8MVJ9 347 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 WWP2O00308 870 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 COQ9O75208 318 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 ITGA2P17301 1181 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 RRM2P31350 389 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 CCT3P49368 545 aaKnown RBP17.82■□□□□ 0.44
CCM2-216ENST00000488727 PRKAG1P54619 331 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 DSTNP60981 165 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 IL5RAQ01344 420 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 GPR107Q5VW38 600 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 PCSK4Q6UW60 755 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 EXD3Q8N9H8 876 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 ATG16L2Q8NAA4 619 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 NUP43Q8NFH3 380 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 OR5L2Q8NGL0 311 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 OR4C15Q8NGM1 316 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 SPPL2AQ8TCT8 520 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 GEMIN6Q8WXD5 167 aaKnown RBP17.82■□□□□ 0.44
CCM2-216ENST00000488727 DTNBP1Q96EV8 351 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 RUBCNLQ9H714 662 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 C3orf14Q9HBI5 128 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 A4GALTQ9NPC4 353 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 PRODH2Q9UF12 536 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 CFL2Q9Y281 166 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 GMPPBQ9Y5P6 360 aa17.82■□□□□ 0.44
CCM2-216ENST00000488727 ITGA10O75578 1167 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 OR2J2O76002 312 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 ANGPTL1O95841 491 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 PRR5P85299 388 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms