RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 HHATLQ9HCP6 504 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 CRIM1Q9NZV1 1036 aa16.01■□□□□ 0.15
ITGB1-215ENST00000488494 A0A1W2PQD3 144 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 LINC01387J3KSC0 135 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 ANKRD28O15084 1053 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 ALDOCP09972 364 aaKnown RBP16■□□□□ 0.15
ITGB1-215ENST00000488494 SUCLG1P53597 346 aaKnown RBP16■□□□□ 0.15
ITGB1-215ENST00000488494 CLNS1AP54105 237 aaKnown RBP16■□□□□ 0.15
ITGB1-215ENST00000488494 NME5P56597 212 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 CLDN15P56746 228 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 EEFSECP57772 596 aaKnown RBP16■□□□□ 0.15
ITGB1-215ENST00000488494 PLPPR5Q32ZL2 321 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 FLYWCH1Q4VC44 716 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 SPANXN4Q5MJ08 99 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 OGFOD2Q6N063 350 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 MISPQ8IVT2 679 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 LRRC34Q8IZ02 419 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 OR8J2Q8NGG1 315 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 TESCQ96BS2 214 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 SLC35G5Q96KT7 338 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 NPAS1Q99742 590 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 KLHDC3Q9BQ90 382 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 PINK1Q9BXM7 581 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 MED17Q9NVC6 651 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 THAP1Q9NVV9 213 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 JKAMPQ9P055 326 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 FOXD3Q9UJU5 478 aaPredicted RBP16■□□□□ 0.15
ITGB1-215ENST00000488494 AP4B1Q9Y6B7 739 aa16■□□□□ 0.15
ITGB1-215ENST00000488494 A0A087WZY1 265 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 GOLGA8QA0A0J9YX86 632 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 A0A1W2PNV4 684 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 GOLGA8OA6NCC3 632 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 E9PBE3 544 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 GOLGA8NF8WBI6 632 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 KITP10721 976 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 CAPN3P20807 821 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 PEX19P40855 299 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 CPA2P48052 419 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 SLC18A1P54219 525 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 ZNF117Q03924 483 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 FAM174BQ3ZCQ3 159 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.99■□□□□ 0.15
ITGB1-215ENST00000488494 ATG16L1Q676U5 607 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 LUZP2Q86TE4 346 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 GGNQ86UU5 652 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 ZNF614Q8N883 585 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 B4GALNT2Q8NHY0 566 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 FIG4Q92562 907 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 ZBTB8AQ96BR9 441 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 ZNF845Q96IR2 970 aaPredicted RBP15.99■□□□□ 0.15
ITGB1-215ENST00000488494 RNF145Q96MT1 663 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 WDR55Q9H6Y2 383 aaPredicted RBP15.99■□□□□ 0.15
ITGB1-215ENST00000488494 AIG1Q9NVV5 245 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 PACSIN3Q9UKS6 424 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 CCDC168Q8NDH2 2452 aa15.99■□□□□ 0.15
ITGB1-215ENST00000488494 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 C7orf72A4D263 438 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 TRPC5OSA6NMA1 111 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 C9JVG2 144 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 HDAC3O15379 428 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 OIP5O43482 229 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 TNFRSF21O75509 655 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 TNFSF13O75888 250 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 EPHA3P29320 983 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 CASP9P55211 416 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 PHC1P78364 1004 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 CASP8Q14790 479 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 PON3Q15166 354 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 DPY19L1Q2PZI1 675 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 NDUFAF6Q330K2 333 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 ANXA8L1Q5VT79 327 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 C6orf120Q7Z4R8 191 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 GTPBP8Q8N3Z3 284 aaPredicted RBP15.98■□□□□ 0.15
ITGB1-215ENST00000488494 METTL25Q8N6Q8 603 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 CNEP1R1Q8N9A8 125 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 FNDC9Q8TBE3 224 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 RAB3IL1Q8TBN0 382 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 PHOSPHO1Q8TCT1 267 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 ACTRT2Q8TDY3 377 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 TEX37Q96LM6 180 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 RBM24Q9BX46 236 aaKnown RBP15.98■□□□□ 0.15
ITGB1-215ENST00000488494 HOXD1Q9GZZ0 328 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 TMEM185BQ9H7F4 350 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 GALNT8Q9NY28 637 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 PCDHGB4Q9UN71 923 aa15.98■□□□□ 0.15
ITGB1-215ENST00000488494 NPIPB9F8W1W9 429 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 EIF1AYO14602 144 aaKnown RBP15.97■□□□□ 0.15
ITGB1-215ENST00000488494 SCN2BO60939 215 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 SOX30O94993 753 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 CPSF4O95639 269 aaKnown RBP15.97■□□□□ 0.15
ITGB1-215ENST00000488494 MATN1P21941 496 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 S100A3P33764 101 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 CPOXP36551 454 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 UFM1P61960 85 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 SIRPAP78324 504 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 SORDQ00796 357 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 OCRLQ01968 901 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 FOXF1Q12946 379 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 KLHL26Q53HC5 615 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 OR2A2Q6IF42 318 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms