RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SH3YL1Q96HL8 342 aaPredicted RBP18.7■□□□□ 0.58
NECAB3-213ENST00000488489 MCHR1Q99705 422 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 OR8D2Q9GZM6 311 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 CACYBPQ9HB71 228 aaKnown RBP18.7■□□□□ 0.58
NECAB3-213ENST00000488489 SELENONQ9NZV5 590 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 CLCA3PQ9Y6N3 262 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 CYP7B1O75881 506 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 DDAH2O95865 285 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 IGKV3-11P04433 115 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 GKN3PP0CG01 181 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 OCA2Q04671 838 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 ITGADQ13349 1161 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 LINC00299Q6ZSB3 139 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 AMER2Q8N7J2 671 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 OR7G1Q8NGA0 311 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 OR4K5Q8NGD3 323 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 FAR1Q8WVX9 515 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 PMM1Q92871 262 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 LMF1Q96S06 567 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 APOL4Q9BPW4 351 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 Q9N2J8 555 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 REV1Q9UBZ9 1251 aa18.7■□□□□ 0.58
NECAB3-213ENST00000488489 ADAP00813 363 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 RORAP35398 523 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 ELAVL1Q15717 326 aaKnown RBP18.69■□□□□ 0.58
NECAB3-213ENST00000488489 EIPR1Q53HC9 387 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 PLA2G2CQ5R387 149 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 PDZK1Q5T2W1 519 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 ZER1Q7Z7L7 766 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 TMCO5AQ8N6Q1 288 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 STT3BQ8TCJ2 826 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 SLC2A12Q8TD20 617 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 ZNF721Q8TF20 911 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 ARSGQ96EG1 525 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 HMG20AQ9NP66 347 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 RASSF1Q9NS23 344 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 MGAT4BQ9UQ53 548 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 HSPE1-MOB4S4R3N1 261 aa18.69■□□□□ 0.58
NECAB3-213ENST00000488489 A0A087WUU8 490 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 PTGES3LE9PB15 166 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 AP3D1O14617 1153 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 ANGPTL1O95841 491 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 NR4A1P22736 598 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 GGT2P36268 569 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 GRK6P43250 576 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 EMX1Q04741 257 aaPredicted RBP18.68■□□□□ 0.58
NECAB3-213ENST00000488489 TARDBPQ13148 414 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■■■■□ 22.1
NECAB3-213ENST00000488489 MAD2L1BPQ15013 274 aaPredicted RBP18.68■□□□□ 0.58
NECAB3-213ENST00000488489 NKAIN1Q4KMZ8 207 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 LANCL3Q6ZV70 420 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 PPP1R3BQ86XI6 285 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 ENTHD1Q8IYW4 607 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 BCORP1Q8N888 145 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 LOXL4Q96JB6 756 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 GPA33Q99795 319 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 CTRCQ99895 268 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 WDR12Q9GZL7 423 aaKnown RBP18.68■□□□□ 0.58
NECAB3-213ENST00000488489 TGIF2Q9GZN2 237 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 CCDC90BQ9GZT6 254 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 FTSJ1Q9UET6 329 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 PRODH2Q9UF12 536 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 CBLCQ9ULV8 474 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 IGLV3-12A0A075B6K2 115 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 KPNA4O00629 521 aaPredicted RBP18.68■□□□□ 0.58
NECAB3-213ENST00000488489 GUSBP08236 651 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 IGFBP1P08833 259 aaPredicted RBP18.68■□□□□ 0.58
NECAB3-213ENST00000488489 ZNF883P0CG24 379 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 MMP11P24347 488 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 CHMP24386 653 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 HTR2AP28223 471 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 PTGES3Q15185 160 aaKnown RBP18.68■□□□□ 0.58
NECAB3-213ENST00000488489 SMN1Q16637 294 aaKnown RBP18.68■□□□□ 0.58
NECAB3-213ENST00000488489 TMEM236Q5W0B7 351 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 ZNF385CQ66K41 422 aaPredicted RBP18.68■□□□□ 0.58
NECAB3-213ENST00000488489 NKAIN4Q8IVV8 208 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 VMP1Q96GC9 406 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 NEURL2Q9BR09 285 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 MESP1Q9BRJ9 268 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 UCK2Q9BZX2 261 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 AKIP1Q9NQ31 210 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 OR10H1Q9Y4A9 318 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 PCDHGA5Q9Y5G8 931 aa18.68■□□□□ 0.58
NECAB3-213ENST00000488489 RALGAPA1Q6GYQ0 2036 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 KIF26BQ2KJY2 2108 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 XPNPEP2O43895 674 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 ZGLP1P0C6A0 271 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 FMO3P31513 532 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 ZFP36L1Q07352 338 aaKnown RBP18.67■□□□□ 0.58
NECAB3-213ENST00000488489 ST3GAL3Q11203 375 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 CLPPQ16740 277 aaPredicted RBP18.67■□□□□ 0.58
NECAB3-213ENST00000488489 PLEKHM3Q6ZWE6 761 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 GDF7Q7Z4P5 450 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 APH1BQ8WW43 257 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 NUDT9Q9BW91 350 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 RNF6Q9Y252 685 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 NPIPB9F8W1W9 429 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 SLC22A1O15245 554 aa18.67■□□□□ 0.58
NECAB3-213ENST00000488489 WBP4O75554 376 aaKnown RBP18.67■□□□□ 0.58
NECAB3-213ENST00000488489 LDOC1O95751 146 aaPredicted RBP18.67■□□□□ 0.58
NECAB3-213ENST00000488489 ACVR2AP27037 513 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms