RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TNFSF11O14788 317 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 ADAMDEC1O15204 470 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 KLF4O43474 513 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 SS18L1O75177 396 aaPredicted RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 CHEK2O96017 543 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 FPR1P21462 350 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 ADSLP30566 484 aaPredicted RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 ALDH3A1P30838 453 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 LCN1P31025 176 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 RAC1P63000 192 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 CD226Q15762 336 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 PLPPR5Q32ZL2 321 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 ARL13AQ5H913 290 aaPredicted RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 Q5PR19 223 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 ZCCHC12Q6PEW1 402 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 CLEC9AQ6UXN8 241 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 STAC2Q6ZMT1 411 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 CIARTQ8N365 385 aaPredicted RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 COX18Q8N8Q8 333 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 OR6K3Q8NGY3 331 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 OR2V1Q8NHB1 315 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 NUDT8Q8WV74 236 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 TWIST2Q8WVJ9 160 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 OSTF1Q92882 214 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 ZBTB8AQ96BR9 441 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 MTERF3Q96E29 417 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 FAM120BQ96EK7 910 aaKnown RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 SH3YL1Q96HL8 342 aaPredicted RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 GMPPAQ96IJ6 420 aaPredicted RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 RNF145Q96MT1 663 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 ZNF395Q9H8N7 513 aaPredicted RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 SIRT3Q9NTG7 399 aaPredicted RBP10.92□□□□□ -0.66
VPS16-208ENST00000487461 GIMAP2Q9UG22 337 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 ATP6V1HQ9UI12 483 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 MID2Q9UJV3 735 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 EMC9Q9Y3B6 208 aa10.92□□□□□ -0.66
VPS16-208ENST00000487461 TLDC2A0PJX2 215 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 SCDO00767 359 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 PIP5K1BO14986 540 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 EFNA2O43921 213 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 LY6G6DO95868 133 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 PLGP00747 810 aaPredicted RBP10.91□□□□□ -0.66
VPS16-208ENST00000487461 HMGN2P05204 90 aaKnown RBP10.91□□□□□ -0.66
VPS16-208ENST00000487461 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 LAMP1P11279 417 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 HPGDP15428 266 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 ASMTP46597 345 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 SERPINB4P48594 390 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 PRIM2P49643 509 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 ZNF41P51814 821 aaPredicted RBP10.91□□□□□ -0.66
VPS16-208ENST00000487461 CTBP2P56545 445 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 POU6F2P78424 691 aaPredicted RBP10.91□□□□□ -0.66
VPS16-208ENST00000487461 MLC1Q15049 377 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 PRSS57Q6UWY2 283 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 LRIG3Q6UXM1 1119 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 R3HCC1LQ7Z5L2 792 aaKnown RBP10.91□□□□□ -0.66
VPS16-208ENST00000487461 DDIASQ8IXT1 998 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 BANPQ8N9N5 519 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 OR7A2PQ8NGA2 310 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 B4GALNT2Q8NHY0 566 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 PPP1R14CQ8TAE6 165 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 JADE3Q92613 823 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 CDS1Q92903 461 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 CCL19Q99731 98 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 MECRQ9BV79 373 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 BTBD2Q9BX70 525 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 TMEM185BQ9H7F4 350 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 HHATLQ9HCP6 504 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 PAQR5Q9NXK6 330 aaPredicted RBP10.91□□□□□ -0.66
VPS16-208ENST00000487461 SLC17A7Q9P2U7 560 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 MCTS1Q9ULC4 181 aaKnown RBP10.91□□□□□ -0.66
VPS16-208ENST00000487461 PRR14LQ5THK1 2151 aa10.91□□□□□ -0.66
VPS16-208ENST00000487461 A0A1W2PQD3 144 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 OIP5O43482 229 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 NPHS1O60500 1241 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 PEX11AO75192 247 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 SYNGR4O95473 234 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 NID1P14543 1247 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 SHC1P29353 583 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 RNF144AP50876 292 aaPredicted RBP10.9□□□□□ -0.66
VPS16-208ENST00000487461 CARD18P57730 90 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 LASP1Q14847 261 aaKnown RBP10.9□□□□□ -0.66
VPS16-208ENST00000487461 HBMQ6B0K9 141 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 C20orf204Q6ZNR8 217 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 ESPNLQ6ZVH7 1005 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 YTHDF3Q7Z739 585 aaKnown RBP10.9□□□□□ -0.66
VPS16-208ENST00000487461 TRABD2AQ86V40 505 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 MISPQ8IVT2 679 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 LILRA2Q8N149 483 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 OR2W6PQ8NHA6 318 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 AGR3Q8TD06 166 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 ROBO4Q8WZ75 1007 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 CAVIN3Q969G5 261 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 ARSGQ96EG1 525 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 PERPQ96FX8 193 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 PPP3R2Q96LZ3 170 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 C3orf30Q96M34 536 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 Q96MF0 132 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 STACQ99469 402 aa10.9□□□□□ -0.66
VPS16-208ENST00000487461 PIGUQ9H490 435 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms